Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 15 Aligned Residues 296 % Identity 18% Template c3p0jD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: leishmania major tyrosyl-trna synthetase in complex with tyrosinol,2 triclinic crystal form 1 Resolution 2.89 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																			.	.	.
Query SS confidence																																		.																			.	.	.
Query Sequence		T	K	P	I	V	F	S	G	A	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	.	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	.	.	.	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S
Query Conservation																																		.																			.	.	.
Alig confidence																																		.																			.	.	.
Template Conservation
Template Sequence		P	L	I	R	C	Y	D	G	F	E	P	S	G	R	M	H	I	A	Q	G	I	F	K	A	V	N	V	N	K	C	T	A	A	G	C	E	F	V	F	W	V	A	D	W	F	A	L	M	N	D	K	V	G	G	E	L	E	K	I	R	I	V	G	R	Y	L	I	E	V	W	K	A	A	G	M	D	M	D	K	V
Template Known Secondary structure		S	S											S	S		B																		T																T		S	T	T																				T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		78	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure									.													.
Query SS confidence									.													.
Query Sequence		T	I	F	V	Q	S	H	.	V	P	E	H	A	Q	L	G	W	A	L	N	.	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	L	V	P	V	G	E	D	Q	K	Q	H	L	E
Query Conservation									.													.
Alig confidence									.													.
Template Conservation
Template Sequence		L	F	L	W	S	S	E	E	I	T	S	H	A	D	T	Y	W	R	M	V	L	D	I	G	R	Q	N	T	I	A	R	I	K	K	C	C	T	I	M	G	K	T	E	G	T	L	T	A	A	Q	V	L	Y	P	L	M	Q	C	C	D	I	F	F	L	K	A	D	I	C	Q	L	G	L	D	Q	R	K	V	N	M
Template Known Secondary structure												T	T														T	S							T	T					T	S			S	S			S	S		S													T	T		S					B	G	G	G
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.					.	.	230	.
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		L	S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	A	V	T	D	S	.	.	.	.	D	E	P	P
Query Conservation																																																																										.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.																				.	.																								.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.																				.	.
Template Sequence		L	A	R	E	Y	C	D	L	I	G	R	K	L	K	P	V	I	L	S	H	.	.	.	.	.	.	.	.	H	M	L	A	G	L	K	Q	G	Q	A	K	M	S	K	S	D	P	D	.	.	S	A	I	F	M	E	D	T	E	E	D	V	A	R	K	I	R	Q	A	Y	C	P	R	V	K	Q	S	A	S	A	I
Template Known Secondary structure											T										B	.	.	.	.	.	.	.	.						S	S	T	T		S	S			S	S		G	G	.	.	G	S		B	T	T												T					S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210									.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.															.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		V	V	R	Y	D	V	Q	N	K	A	G	V	S	N	L	L	D	I	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	.	.	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		T	D	D	G	A	P	V	A	T	D	D	R	N	P	V	L	D	Y	F	Q	C	V	V	Y	A	R	P	G	A	A	A	T	I	D	G	T	T	Y	A	T	Y	E	D	L	E	Q	A	F	V	S	D	E	V	S	E	D	A	L	K	S	C	L	I	D	E	V	N	A	L	L	E	P	V	R	Q	H	F	A	S	N
Template Known Secondary structure			S	S							T	T												T	S	S	S	T	T					S	S	S				S	S											T	S	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		296	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	D	E	A	F	L	Q	Q	V	M	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	A	H	E	L	L	E	A	V	K	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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