Job Description P00954 Confidence 55.83% Date Thu Jan 5 10:57:18 GMT 2012 Rank 87 Aligned Residues 176 % Identity 18% Template c3mxtA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pantothenate synthetase; PDBTitle: crystal structure of pantoate-beta-alanine ligase from campylobacter2 jejuni Resolution 1.85 Å

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		9	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure							.																													.
Query SS confidence							.																													.
Query Sequence		G	A	Q	P	S	.	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	D	Y	H	C	I	Y	C	I	.	V	D	Q	H	A	I	T	V	R	Q	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T	I	F	V	Q	S	H	V	P
Query Conservation							.																													.
Alig confidence							.										.	.	.	.																.																																	.	.	.	.				.	.	.	.
Template Conservation																	.	.	.	.																																																	.	.	.	.				.	.	.	.
Template Sequence		G	Y	V	P	T	X	G	F	L	H	D	G	H	L	S	.	.	.	.	L	V	K	H	A	K	T	Q	D	K	V	I	V	S	I	F	V	N	P	X	Q	F	G	P	N	E	D	F	S	S	Y	P	R	D	L	E	R	D	I	K	X	C	Q	D	N	G	V	D	.	.	.	.	X	V	F	.	.	.	.	I	P
Template Known Secondary structure								S	S								.	.	.	.						T	T	S	S										G	G	G			T	T	S		T	T	T	S														T	T		S	.	.	.	.				.	.	.	.
Template Predicted Secondary structure																	.	.	.	.																																																	.	.	.	.				.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90					.	.
		87	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure										.																																														.
Query SS confidence										.																																														.
Query Sequence		E	H	A	Q	L	G	W	A	.	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	.	Q	T	N	L	V	P	V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I	A	Q	R	F
Query Conservation										.																																														.
Alig confidence										.												.	.	.	.	.	.	.	.	.																										.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		D	A	T	Q	X	Y	L	K	N	F	S	T	Y	V	D	X	N	T	I	T	.	.	.	.	.	.	.	.	.	D	K	L	C	G	A	K	R	P	G	H	F	R	G	V	C	T	V	L	T	K	F	F	N	I	L	N	P	D	I	V	Y	X	G	Q	K	D	A	Q	Q	C	V	V	V	R	H	X	V	D	D	L
Template Known Secondary structure							S		T	T								S	S	S	T	.	.	.	.	.	.	.	.	.	T	S						S	T	T																			S						G	G	G														T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.										.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	A
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.																			.	.	.	.	.	.						.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.																			.	.	.	.	.	.						.	.	.	.
Template Sequence		N	.	.	.	.	.	.	.	.	F	D	L	K	I	Q	I	C	P	I	I	R	E	E	D	G	L	A	.	.	.	.	.	.	K	S	S	R	N	.	.	.	.	V	Y	L	S	K	E	E	R	K	A	S	L	A	I	S	Q	S
Template Known Secondary structure		T	.	.	.	.	.	.	.	.		S	S									B		T	T	S		B	.	.	.	.	.	.			G	G	G	.	.	.	.	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																			.	.	.	.	.	.						.	.	.	.
Template SS confidence
		164									.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions