Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 7 Aligned Residues 318 % Identity 36% Template c3m5wB_ PDB info PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from2 campylobacter jejuni Resolution 2.32 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	I	V	F	S	G	A	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T	I	F	V	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	X	R	V	L	T	G	L	Q	P	S	G	D	L	H	I	G	N	Y	F	G	A	I	K	Q	X	V	D	A	Q	E	K	S	Q	X	F	X	F	I	A	N	Y	H	A	X	T	S	S	Q	D	G	E	K	L	K	Q	N	S	L	K	A	A	A	A	F	L	S	L	G	I	D	P	Q	K	S	V	F	W	L	Q
Template Known Secondary structure													S			B							T								T	T	T	S																																				T			T	T	T	S					G
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	V	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	L	V	P	V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I	A	Q
Query Conservation
Alig confidence																																				.
Template Conservation																																				.
Template Sequence		S	D	V	K	E	V	X	E	L	Y	W	I	L	S	Q	F	T	P	X	G	L	L	E	R	A	H	S	Y	K	D	K	V	A	K	.	G	L	S	A	S	H	G	L	F	S	Y	P	V	L	X	A	A	D	I	L	L	F	D	T	R	I	V	P	V	G	K	D	Q	I	Q	H	V	E	I	A	R	D	I	A	L
Template Known Secondary structure		G	G		T											T	T								T											.	T																					T	T		S						T	T	T
Template Predicted Secondary structure																																				.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	A	V	T	D	S	D	E	P	P	V	V	R	Y	D	V	Q	N	K	A	G
Query Conservation
Alig confidence																		.	.	.	.																		.	.	.																													.	.
Template Conservation																		.	.	.	.																		.	.	.																													.	.
Template Sequence		K	V	N	N	E	W	G	E	I	F	T	L	P	E	A	R	.	.	.	.	V	N	E	A	V	V	V	G	T	D	G	A	K	X	S	K	S	.	.	.	Y	Q	N	T	I	D	I	F	S	S	E	K	T	L	K	K	Q	I	S	S	I	V	T	D	S	T	A	L	.	.	E	D	P	K	D	H	E	N	C	N
Template Known Secondary structure								S	S									.	.	.	.							B		T	T	S	S	B			T	T	.	.	.	T	T				B	S	S	S											T								T	.	.	T	S				G	G	G
Template Predicted Secondary structure																		.	.	.	.																		.	.	.																													.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	N	L	L	D	I	L	S	A	V	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F	R	N	D	E	A	F	L	Q	Q	V	M	K	D	G	A	E	K	A	S	A	H	A	S	R	T	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	F	K	I	A	K	L	F	L	D	E	S	G	Q	K	E	L	Q	I	R	Y	E	K	G	G	E	G	Y	G	H	F	K	I	Y	L	N	E	L	V	N	A	Y	F	K	E	A	R	E	K	Y	N	E	L	L	E	K	P	S	H	L	K	E	I	L	D	F	G	A	T	K	A	R	K	I	A	Q	E	K	X	Q
Template Known Secondary structure							G	G	G																	S	S																	T													S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		323	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	Y	E	A	I	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	I	Y	E	K	I	G	L
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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