Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 33 Aligned Residues 242 % Identity 21% Template c3i05B_ PDB info PDB header:ligase Chain: B: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase from trypanosoma brucei Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																			.																			.
Query SS confidence																.																			.																			.
Query Sequence		T	K	P	I	V	F	S	G	A	Q	P	S	G	E	.	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	.	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	.	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T
Query Conservation																.																			.																			.
Alig confidence																.																			.																			.
Template Conservation
Template Sequence		Q	P	F	Y	L	Y	T	G	R	G	P	S	S	E	S	M	H	M	G	H	L	I	P	F	M	F	T	K	W	L	Q	D	S	F	R	V	P	L	V	I	Q	M	T	D	D	E	K	F	Y	F	R	N	I	P	M	E	Q	V	E	A	M	T	T	E	N	I	K	D	I	I	A	M	G	F	D	P	E	L	T	F
Template Known Secondary structure														S	S			B	G	G	G	S														T																S																				T	T	T			T	T	S
Template Predicted Secondary structure
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		79	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.													.	.	.
Predicted Secondary structure													.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	F	V	Q	S	H	V	P	E	H	A	.	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	.	.	.	.	.	.	.	.	.	.	.	.	L	V	P
Query Conservation													.																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.																			.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.
Template Sequence		I	F	R	D	F	D	Y	M	G	C	M	Y	R	T	V	A	K	I	E	R	A	F	T	A	S	Q	V	R	G	C	.	.	.	.	.	.	.	F	G	F	A	M	E	D	N	C	G	R	W	M	F	P	A	I	Q	A	A	P	S	F	S	A	A	F	P	H	I	F	P	P	S	M	G	N	V	F	C	L	I	P
Template Known Secondary structure									T	T	T	S											S									.	.	.	.	.	.	.					T	T	S													G	G	G	S	G	G	G		T	T	T	S		G	G	G
Template Predicted Secondary structure																																.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180								.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	A	V	T
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																													.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		Q	A	I	D	Q	D	P	Y	F	R	L	T	R	D	I	A	P	R	L	G	Y	L	K	P	A	V	I	.	.	.	.	.	.	.	.	.	H	S	K	F	F	P	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	V	L	L	T	D	T	E	K	M	V	K	D	K	I	N	K	P	.	.
Template Known Secondary structure				G	G	G										T					T								.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				B	T	T														.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250										.	.	.	.	.	.	.	.																.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		D	S	D	E	P	P	V	V	R	Y	D	V	Q	N	K	A	G	V	S	N	L	L	D	I	L	S	A	V	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	.	.	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F	R	N	D
Query Conservation																																															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	W	L	S	F	F	L	E	.	D	D	E	E	L	A	R	V	K	K	E	G	R	I	M	T	G	E	V	K	K	L	L	I	N	T	I	T	A	I	T	K	T	H	Q	E	K	R	K	L	V	T	D	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.									T	T				S																									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
																							314	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions