Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 18 Aligned Residues 278 % Identity 18% Template c3hzrD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase homolog from entamoeba histolytica Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																			.
Query SS confidence																																		.																			.
Query Sequence		T	K	P	I	V	F	S	G	A	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	.	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	.	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T	I
Query Conservation																																		.																			.
Alig confidence																																		.																			.
Template Conservation
Template Sequence		K	P	T	F	I	F	I	Q	K	Y	P	Q	K	E	V	A	L	E	E	Y	I	T	L	E	F	A	R	Y	L	Q	D	A	F	N	I	Q	V	I	I	Q	I	L	D	D	I	K	V	L	N	R	E	A	T	I	N	E	A	S	K	M	S	N	D	L	M	K	Y	I	L	A	F	G	F	N	E	D	K	T	F	I
Template Known Secondary structure														S	S		B	G	G	G																														T	T	S																				T				G	G	G
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.										.	.	.	.	.	.	.
Predicted Secondary structure								.																																																										.	.	.	.	.	.	.	.	.
Query SS confidence								.																																																										.	.	.	.	.	.	.	.	.
Query Sequence		F	V	Q	S	H	V	.	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	.	.	.	.	.	.	.	.	.	L	V	P	V	G	E	D
Query Conservation								.																																																										.	.	.	.	.	.	.	.	.
Alig confidence								.																							.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.
Template Sequence		Y	T	D	Y	Q	Y	F	G	K	M	Y	R	T	I	S	L	V	E	K	A	T	A	Y	N	V	V	Q	P	F	.	.	.	.	.	.	.	F	N	F	E	Y	S	D	N	I	G	K	L	A	S	P	S	I	M	T	A	S	M	F	S	Q	S	Y	S	H	F	F	S	S	P	A	R	C	L	V	L	D	S	I	K
Template Known Secondary structure																												T	T	T	.	.	.	.	.	.	.	S				S	S	S														T	T	S	G	G	G		T	T	T		S	S										G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.								.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		Q	K	Q	H	L	E	L	S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	.	A	V	T	D	S	D
Query Conservation																																																																											.
Alig confidence																		.	.	.	.	.	.								.	.	.																			.	.	.																					.
Template Conservation																		.	.	.	.	.	.								.	.	.																			.	.	.
Template Sequence		N	V	Q	F	H	S	I	I	D	Q	I	A	T	T	L	N	.	.	.	.	.	.	F	I	Q	P	T	V	L	.	.	.	F	H	K	M	V	P	L	L	S	G	V	T	K	F	D	I	P	S	.	.	.	D	H	N	S	I	L	L	S	D	N	A	K	Q	V	E	R	K	I	N	K	L	A	F	S	G	G	R
Template Known Secondary structure		G															T	.	.	.	.	.	.								.	.	.								T	T		T	T			S				.	.	.	T	T	T	S		B	T	T													T	S
Template Predicted Secondary structure																		.	.	.	.	.	.								.	.	.																			.	.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.							.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.																		.	.
Query SS confidence																											.	.																		.	.
Query Sequence		E	P	P	V	V	R	Y	D	V	Q	N	K	A	G	V	S	N	L	L	D	I	L	S	A	V	.	.	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	.	.	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F	R	N	D
Query Conservation																											.	.																		.	.
Alig confidence																											.	.																		.	.
Template Conservation
Template Sequence		N	T	T	E	E	H	K	K	L	G	G	Q	C	D	I	D	V	S	F	Q	L	L	N	I	F	S	S	D	N	A	Q	V	K	D	V	E	E	K	Y	S	K	G	E	L	L	S	G	E	L	K	K	I	V	S	A	S	M	K	D	F	I	V	A	Y	D	A	K	K	K	P	I	T	T	A
Template Known Secondary structure		S	S						T	T				G	G	G												S														T	T		S																									T	T
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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