Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 26 Aligned Residues 263 % Identity 19% Template c3hv0A_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: tryptophanyl-trna synthetase from cryptosporidium parvum Resolution 2.42 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																.																			.																			.	.
Query SS confidence																.																			.																			.	.
Query Sequence		T	K	P	I	V	F	S	G	A	Q	P	S	G	E	.	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	.	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	.	.	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S
Query Conservation																.																			.																			.	.
Alig confidence																.																			.																			.	.
Template Conservation
Template Sequence		E	L	F	Y	L	Y	T	G	R	G	P	S	S	E	S	L	H	V	G	H	L	V	P	F	L	F	T	K	Y	L	Q	D	T	F	K	V	P	L	V	I	Q	L	T	D	D	E	K	F	I	F	K	S	N	L	T	L	E	E	T	H	N	Y	A	Y	E	N	M	K	D	I	I	A	C	G	F	D	P	E	L	T
Template Known Secondary structure													S	S	S	S		B	S	T	T																																T	T																			T	T				T	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		78	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.												.	.	.
Predicted Secondary structure										.																																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	I	F	V	Q	S	H	V	.	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	.	.	.	.	.	.	.	.	.	.	.	L	V	P
Query Conservation										.																																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																							.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.
Template Sequence		F	I	F	T	N	L	E	Y	I	A	E	L	Y	P	D	I	L	R	I	E	K	K	I	S	C	S	Q	I	K	S	I	.	.	.	.	.	.	.	F	G	F	K	D	S	C	N	V	G	K	F	A	F	P	A	V	Q	A	A	P	A	F	S	S	S	F	P	H	I	F	G	G	R	T	D	I	H	C	L	V	P
Template Known Secondary structure																								S									.	.	.	.	.	.	.					T	T	S													G	G	G	S	G	G	G						T	T		S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.								.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	.	A	V
Query Conservation																																																																															.
Alig confidence																													.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																													.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	A	I	D	Q	D	P	Y	F	R	M	V	R	D	V	A	P	R	L	G	Y	L	K	P	S	S	I	.	.	.	.	.	.	.	.	.	H	S	I	F	L	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	S	I	F	V	N	D	N	E	E	S	I	R	N	K	I	M	K	Y	A	F
Template Known Secondary structure				G	G	G											T	G	G	G	T								.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					B	T	T														S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.										.	.	.	.	.	.	.																460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.																		.	.
Query SS confidence																															.	.																		.	.
Query Sequence		T	D	S	D	E	P	P	V	V	R	Y	D	V	Q	N	K	A	G	V	S	N	L	L	D	I	L	S	A	V	.	.	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	.	.	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F	R	N	D
Query Conservation																															.	.																		.	.
Alig confidence												.	.	.																	.	.																		.	.
Template Conservation												.	.	.
Template Sequence		S	G	G	Q	A	T	E	E	E	Q	.	.	.	G	A	N	L	D	V	D	V	S	W	Q	Y	L	R	F	L	M	E	D	D	E	K	L	E	E	I	G	K	K	Y	S	S	G	E	M	L	S	G	E	I	K	S	I	L	V	Q	E	L	V	K	L	T	K	N	H	Q	K	N	R	E	A	I	N	D	D
Template Known Secondary structure				S		S	S	S				.	.	.				T	T	T																											T	S	S																										T
Template Predicted Secondary structure												.	.	.
Template SS confidence
		495	.	.	.	.	500	.	.	.	.				.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions