Job Description P00954 Confidence 97.69% Date Thu Jan 5 10:57:18 GMT 2012 Rank 61 Aligned Residues 192 % Identity 15% Template c3fnrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:arginyl-trna synthetase; PDBTitle: crystal structure of putative arginyl t-rna synthetase from2 campylobacter jejuni; Resolution 2.20 Å

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		3	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.				.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure							.	.																				.	.	.								.																																								.	.	.	.
Query SS confidence							.	.																				.	.	.								.																																								.	.	.	.
Query Sequence		K	P	I	V	F	.	.	S	G	A	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	.	.	.	Q	W	V	N	M	Q	D	.	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	.	.	.	.
Query Conservation							.	.																				.	.	.								.																																								.	.	.	.
Alig confidence							.	.																				.	.	.								.									.	.	.	.	.																											.	.	.	.
Template Conservation																																															.	.	.	.	.
Template Sequence		E	S	F	L	L	E	Y	V	S	A	N	P	T	G	P	L	H	I	G	H	A	R	G	A	V	F	G	D	T	L	T	R	L	A	R	H	L	G	Y	K	F	N	T	E	Y	.	.	.	.	.	Y	V	N	D	A	G	N	Q	I	Y	L	L	G	L	S	I	L	L	S	V	K	E	S	I	L	H	E	N	V	E
Template Known Secondary structure													S	S	S	S		B	G	G	G																	T	T								.	.	.	.	.																								T	S
Template Predicted Secondary structure																																															.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.						.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
														73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	P	E	K	S	T	I	F	V	Q	S	H	V	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	E	Q	Y	Y	K	G	E	Y	I	V	D	L	A	K	E	A	F	E	K	F	G	K	E	F	F	S	E	E	N	I	P	S	L	A	D	W	A	K	D	K	M	L	V	L	I	K	Q	N	L	E	Q	A	K	I	K	I	D	S	Y	V	S	E	R	S	Y	Y	D	A	L	N	A	T	L	E	S	L	K	E
Template Known Secondary structure				S	S				S																G	G	G		S	G	G	G																							T	T				S					G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
																																121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	.	.	L	V	P	V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I	A	Q	R	F	N	A	L	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.																								.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		H	K	G	I	Y	E	Q	E	G	K	I	W	L	A	S	S	Q	K	G	D	E	K	D	R	V	I	I	R	E	D	G	R	G	T	Y	L	A	A	D	I	V	Y	H	K	D	K	M	S	R	G	Y	G	K	C	I	N	I	W	G	A	D	H	H	G	Y	I	P	R	M	K	A	A	M	E	F	L	G	.	.	.
Template Known Secondary structure		T	T						T	T						G	G	G	G	T		S	S							T	T	S		B															T	S	S		S								G	G	G	G	G	G										T	T	T	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E
Query Conservation
Alig confidence		.	.	.	.	.																					.						.	.	.
Template Conservation		.	.	.	.	.																					.						.	.	.
Template Sequence		.	.	.	.	.	F	D	S	N	N	L	E	I	I	L	A	Q	M	V	S	L	L	K	D	G	.	E	P	Y	K	M	.	.	.	A	G	N	F	I	L	M	S	D
Template Known Secondary structure		.	.	.	.	.			G	G	G														T	T	.						.	.	.			S	S		B
Template Predicted Secondary structure		.	.	.	.	.																					.						.	.	.
Template SS confidence
							336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360				.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions