Job Description P00954 Confidence 97.90% Date Thu Jan 5 10:57:18 GMT 2012 Rank 58 Aligned Residues 285 % Identity 14% Template c3c8zB_ PDB info PDB header:ligase Chain: B: PDB Molecule:cysteinyl-trna synthetase; PDBTitle: the 1.6 a crystal structure of mshc: the rate limiting2 enzyme in the mycothiol biosynthetic pathway Resolution 1.60 Å

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		3	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20				.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.		.	.	.	.									.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure								.													.	.	.														.										.					.	.	.	.	.	.	.	.
Query SS confidence								.													.	.	.														.										.					.	.	.	.	.	.	.	.
Query Sequence		K	P	I	V	F	S	.	G	A	Q	P	S	G	E	L	T	I	G	N	.	.	.	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	.	D	Y	H	C	I	Y	C	I	V	.	D	Q	H	A	.	.	.	.	.	.	.	.	I	T	V	R	Q	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L
Query Conservation								.													.	.	.														.										.					.	.	.	.	.	.	.	.
Alig confidence								.													.	.	.														.										.					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	A	T	M	Y	V	C	G	I	T	P	Y	D	A	T	H	L	G	H	A	A	T	Y	L	T	F	D	L	V	H	R	L	W	L	D	A	G	H	T	V	Q	Y	V	Q	N	V	T	D	V	D	D	P	L	F	E	R	A	E	R	D	G	I	D	W	R	T	L	G	D	R	E	T	Q	L	F	R	E	D	M	A
Template Known Secondary structure		S										T	T	S			B																				T	T												S												T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.																									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		A	C	G	I	D	P	E	K	S	T	I	F	V	Q	S	H	V	P	E	H	A	Q	L	G	W	A	L	N	C	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	.
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		A	L	R	V	L	P	P	H	D	Y	V	A	A	T	D	A	I	A	E	V	V	E	M	V	E	K	L	L	A	S	G	A	A	Y	I	V	E	D	A	E	Y	P	D	V	Y	F	R	A	D	A	T	A	Q	F	G	Y	E	S	G	Y	D	R	D	T	M	L	T	L	F	A	E	R	G	G	D	P	D	R	P	G
Template Known Secondary structure			T	T					S					G	G	G																T	S					S		S	S	S							T	T	S	S	T	T	T	T	T	T	T														T	T			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
																															124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	L	V	P	V	G	E	D	Q	.	K	Q	H	L	E	L	S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.																		.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		K	S	D	Q	L	D	A	L	L	W	R	A	E	R	P	G	E	P	S	W	P	S	P	F	G	R	G	R	P	G	W	H	V	E	C	S	A	I	A	L	T	R	I	G	T	G	L	D	I	Q	G	G	G	S	D	L	I	F	P	H	H	E	Y	S	A	A	H	A	E	S	V	T	G	E	.	.	.	.	.	.
Template Known Secondary structure			S	S	T	T										T	T	S			B			T	T		S																	T		T	T								G	G	G	T	T	T																.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	A	V	T	D	S	D	E	P	P	V	V	R	Y	D	V	Q	N	K	A	G	V	S	N	L	L	D	I	L	S	A	V
Query Conservation
Alig confidence																		.	.	.								.	.	.				.	.	.	.	.	.	.
Template Conservation																		.	.	.								.	.	.				.	.	.	.	.	.	.
Template Sequence		R	R	F	A	R	H	Y	V	H	T	G	M	I	G	V	L	.	.	.	V	S	Q	L	R	A	Q	.	.	.	G	V	D	.	.	.	.	.	.	.	P	S	A	I	R	L	G	L	F	S	G	H	Y	R	E	D	R	F	W	S	N	E	V	L	D	E	A	N	A	R	L	A	R	W	R	S	A	T	A	L	P
Template Known Secondary structure		S		S		S								B			B	.	.	.							T	.	.	.	T			.	.	.	.	.	.	.										T	S		T	T	S		B																						T	S	S
Template Predicted Secondary structure																		.	.	.								.	.	.				.	.	.	.	.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.				.	.	.								.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.						.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		T	G	Q	S	I	P	E	L	E	K	Q	F	.	.	.	.	.	E	G	K	M	Y	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F	R	N	D	E	A	F	L	Q	Q	V	M
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.
Template Conservation
Template Sequence		E	A	P	D	A	T	D	V	I	A	R	V	R	Q	Y	L	A	D	D	L	D	T	P	K	A	L	A	A	L	D	G	W	C	T	D	A	L	S	Y	G	G	H	D	T	E	S	P	R	L	V	A	T	T	V	D	A	L	L
Template Known Secondary structure		S	B	S															B	T																							S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions