Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 12 Aligned Residues 277 % Identity 22% Template c3a05A_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from2 hyperthermophilic archaeon, aeropyrum pernix k1 complex3 with tryptophan Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		T	K	P	I	V	F	S	G	A	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	D	A	.	.	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T	I
Query Conservation																																																						.	.
Alig confidence																																																						.	.
Template Conservation
Template Sequence		E	R	V	A	V	L	T	G	F	M	P	S	G	K	F	H	F	G	H	K	L	T	V	D	Q	L	I	Y	L	Q	K	N	G	F	K	V	F	V	A	I	A	D	A	E	A	F	A	V	R	R	I	G	R	E	E	A	V	R	I	A	V	E	E	Y	I	A	N	M	I	A	L	G	L	D	P	K	D	T	E	F
Template Known Secondary structure														S			B																T	T															T	T														T	T								T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.									.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure											.																																																			.	.	.	.	.	.	.	.
Query SS confidence											.																																																			.	.	.	.	.	.	.	.
Query Sequence		F	V	Q	S	H	V	P	E	H	.	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	.	.	.	.	.	.	.	.	Y	Q	T	N	L	V	P	V	G	E	D	Q
Query Conservation											.																																																			.	.	.	.	.	.	.	.
Alig confidence											.																				.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	F	Q	T	N	R	G	T	P	Y	F	R	L	I	Q	L	F	S	G	K	V	T	A	A	E	M	E	A	I	.	.	.	.	.	.	.	.	.	.	Y	G	E	L	T	P	A	K	M	M	A	S	L	T	Q	A	A	D	I	L	H	V	Q	L	D	E	Y	G	G	Y	R	H	V	V	V	P	V	G	A	D	Q
Template Known Secondary structure				G	G	G	S												T	T	S	S									.	.	.	.	.	.	.	.	.	.		S	S																		G	G	G	S	G	G	G	T											G	G	G
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.											.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	H	L	E	L	S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	A	V	T	D	S	D	E	P
Query Conservation
Alig confidence																					.	.								.	.	.												.	.									.	.
Template Conservation																					.	.								.	.	.												.	.									.	.
Template Sequence		D	P	H	L	R	L	T	R	D	L	A	D	R	M	A	G	V	V	E	.	.	L	E	R	P	A	S	T	.	.	.	Y	H	K	L	Q	P	G	L	D	G	R	.	.	K	M	S	S	S	R	P	D	.	.	S	T	I	F	L	T	D	P	P	E	V	A	R	N	K	L	F	R	A	L	T	G	G	R	A	T
Template Known Secondary structure															T	T	T	T	S		.	.								.	.	.						B		T	T	S	S	.	.	B			T	T	S	G	G	.	.	G	S		B	T	T												T				S			S	S
Template Predicted Secondary structure																					.	.								.	.	.												.	.									.	.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.			.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.																		.	.
Query SS confidence																									.	.	.																		.	.
Query Sequence		P	V	V	R	Y	D	V	Q	N	K	A	G	V	S	N	L	L	D	I	L	S	A	V	.	.	.	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	.	.	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F	R	N
Query Conservation																									.	.	.																		.	.
Alig confidence																									.	.	.																		.	.
Template Conservation
Template Sequence		A	E	E	Q	R	R	L	G	G	V	P	E	V	C	S	V	Y	H	M	D	L	Y	H	L	M	P	D	D	G	E	V	K	H	I	Y	T	S	C	R	L	G	K	I	L	C	G	E	C	K	Q	I	A	W	E	K	L	E	R	F	L	A	E	H	Q	S	R	L	E	K	A	K	T
Template Known Secondary structure												G	G	G										T	T			S														T
Template Predicted Secondary structure
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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