Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 37 Aligned Residues 269 % Identity 16% Template c2janD_ PDB info PDB header:ligase Chain: D: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: tyrosyl-trna synthetase from mycobacterium tuberculosis in2 unliganded state Resolution 2.9 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		K	P	I	V	F	S	G	A	Q	P	S	G	E	.	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T	I	F	V
Query Conservation															.
Alig confidence															.																																										.
Template Conservation																																																									.
Template Sequence		P	M	T	V	Y	A	G	F	D	P	T	A	P	S	L	H	A	G	H	L	V	P	L	L	T	L	R	R	F	Q	R	A	G	H	R	P	I	V	L	A	G	G	A	T	G	M	I	G	D	T	V	A	E	W	T	.	E	R	I	R	G	Q	L	E	R	F	V	D	F	D	D	S	P	M	G	A	I	V	E	N
Template Known Secondary structure											T	T	S	S	S		B	G	G	G													T	T																							.											S				S	S	T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																							.																						.	.	.	.
Query SS confidence																																							.																						.	.	.	.
Query Sequence		Q	S	H	V	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	.	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	.	.	.	.	Q	T	N	L	V	P	V	G	E	D	Q	K	Q	H	L	E	L
Query Conservation																																							.																						.	.	.	.
Alig confidence																																							.																						.	.	.	.
Template Conservation
Template Sequence		N	L	E	W	T	G	S	L	S	A	I	E	F	L	R	D	I	G	K	H	F	S	V	N	V	M	L	A	R	D	T	I	R	R	R	L	A	G	E	G	I	S	Y	T	E	F	S	Y	L	L	L	Q	A	N	D	Y	V	E	L	H	R	R	H	G	C	T	L	Q	I	G	G	A	D	Q	W	G	N	I	I	A
Template Known Secondary structure		T					T	T										T	G	G	G								S	S									T	T																																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																									.	.	.
Query SS confidence																																																									.	.	.
Query Sequence		S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	.	.	.	D	P	K	S	V	V	K	K	I	K	R	A	V	T	D	S	D	E	P	P	V	V
Query Conservation																																																									.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.									.						.	.											.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.									.						.	.																										.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	R	L	V	R	Q	K	L	G	A	T	V	H	A	L	T	V	P	.	.	.	.	.	.	.	.	.	.	L	V	T	A	A	D	G	T	.	K	F	G	K	S	.	.	T	G	G	G	S	L	W	L	D	P	Q	M	T	S	P	Y	A	W	Y	Q	Y	F	V	N	T	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																					.	.	.	.	.	.	.	.	.	.			B		T	T	S		.	B	T	T	B		.	.	T	T	S		B		B	S	S	T	T	T	S											T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.									.						.	.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.											.	.	.	.	.	.	.	230		.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270		.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																							.
Query SS confidence																																							.
Query Sequence		R	Y	D	V	Q	N	K	A	G	V	S	N	L	L	D	I	L	S	A	V	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	.	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F	R	N	D	E	A	F	L	Q	Q	V	M	K	D	G	A	E	K
Query Conservation																																							.
Alig confidence		.	.	.	.	.																																	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	A	D	A	D	V	I	R	Y	L	R	W	F	T	F	L	S	A	D	E	L	A	E	L	E	Q	A	T	A	Q	R	P	Q	Q	R	A	A	Q	R	R	L	A	S	E	L	T	V	L	V	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	A	T	A	A
Template Known Secondary structure		.	.	.	.	.		T	T	T									S																		G	G	G																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310																				.	.	.	.	.	.
		313	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	A	H	A	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	H	A	S	R	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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