Job Description P00954 Confidence 97.97% Date Thu Jan 5 10:57:18 GMT 2012 Rank 56 Aligned Residues 174 % Identity 28% Template c2ja2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: mycobacterium tuberculosis glutamyl-trna synthetase Resolution 1.65 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.
Predicted Secondary structure																								.																																													.	.	.	.	.	.	.
Query SS confidence																								.																																													.	.	.	.	.	.	.
Query Sequence		P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	.	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	.	.	.	.	.	.	.	T	I	F	V	Q	S
Query Conservation																								.																																													.	.	.	.	.	.	.
Alig confidence																								.																		.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.
Template Sequence		P	T	G	T	P	H	V	G	L	V	R	T	A	L	F	N	W	A	Y	A	R	H	T	G	G	T	F	V	F	R	I	E	D	T	D	A	Q	R	D	S	.	.	.	.	.	.	E	E	S	Y	L	A	L	L	D	A	L	R	W	L	G	L	D	W	D	E	G	P	E	V	G	G	P	Y	G	P	Y	R	Q	S
Template Known Secondary structure		S	S	S	S		B																		T							B					T	T	T			.	.	.	.	.	.															T				S	B	B	T	T	T	B		T	T				B	G	G
Template Predicted Secondary structure																																										.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	V	P	E	H	A	Q	L	G	W	A	.	.	.	.	.	.	.	.	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	A	E	I	Y	R	D	V	L	A	R	L	L	A	A	G	E	A	Y	H	A	F	S	T	P	E	E	V	E	A	R	H	V	A	A	G	R	N	P	K	L	G	Y	D	N	F	D	R	H	L	T	D	A	Q	R	A	A	Y	L	A	E	G	R	Q	P	V	V	R	L	R	M	P	D	D	D	L	A	W	N
Template Known Secondary structure		G															T	T	S																		T	T			T	T	S					G	G	G	G												T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
																									124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	L	V	P	V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I	A	Q	R	F	.	.	.	.	.	N	A	L	Y	G	E	I	F	K	V	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template Conservation
Template Sequence		D	L	V	R	G	P	V	T	F	A	A	G	S	V	P	D	F	A	L	T	R	A	S	G	D	P	L	Y	T	L	V	N	P	C	D	D	A	L	M	K	I	T	H	V	L	R	G	E	D	L	L	P	S	T	P	R	Q	L	A	L	H	Q	A	L	I	R	I	G	V	A	E	R	I	P	K	F	A	H	L	P
Template Known Secondary structure			T	T	T							T	T		S				B	S	B		T	T	S		B													T	T								G	G	G	G	G	G														T	T	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	L	.	.	.	.	.	.	.	.	.	.	.	G	E	G	T	K	K	L	S	K	R	D	P	Q
Template Known Secondary structure					.	.	.	.	.	.	.	.	.	.	.		S	S	S	S	B			T	T	S	G	G
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.												.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions