Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 9 Aligned Residues 313 % Identity 35% Template c2g36A_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase (ec 6.1.1.2)2 (tryptophan-trna ligase)(trprs) (tm0492) from thermotoga maritima at3 2.50 a resolution Resolution 2.50 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																															.																			.
Query SS confidence																															.																			.
Query Sequence		I	V	F	S	G	A	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	.	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	.	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T	I	F	V	Q
Query Conservation																															.																			.
Alig confidence																															.																			.
Template Conservation
Template Sequence		R	I	L	S	G	M	R	P	T	G	K	L	H	I	G	H	L	V	G	A	L	E	N	W	V	K	L	Q	E	E	G	N	E	C	F	Y	F	V	A	D	W	H	A	L	T	T	H	Y	D	D	V	S	K	L	K	E	Y	T	R	D	L	V	R	G	F	L	A	C	G	I	D	P	E	K	S	V	I	F	V	Q
Template Known Secondary structure											S	S		B						T											T	T																	T	T			T	T															T	T			T	T	T	S					G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	V	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	L	V	P	V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I	A	Q
Query Conservation
Alig confidence																																	.	.	.	.	.
Template Conservation																																	.	.	.	.	.
Template Sequence		S	G	V	K	E	H	A	E	L	A	L	L	F	S	M	I	V	S	V	S	R	L	E	R	V	P	T	Y	K	E	I	.	.	.	.	.	D	L	S	T	A	G	F	L	I	Y	P	V	L	Q	A	A	D	I	L	I	Y	K	A	E	G	V	P	V	G	E	D	Q	V	Y	H	I	E	L	T	R	E	I	A	R
Template Known Secondary structure		G	G		T											T	T	S							T						T		.	.	.	.	.				S					T											T	T	T		S						G	G	G
Template Predicted Secondary structure																																	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	A	V	T	D	S	D	E	P	P	V	V	R	Y	D	V	Q	N	K	A	G
Query Conservation
Alig confidence																		.	.	.																			.	.	.																												.	.	.
Template Conservation																		.	.	.																			.	.	.																												.	.	.
Template Sequence		R	F	N	Y	L	Y	D	E	V	F	P	E	P	E	A	I	.	.	.	L	S	R	V	P	K	L	P	G	T	D	G	R	K	M	S	K	S	.	.	.	Y	G	N	I	I	N	L	E	I	S	E	K	E	L	E	Q	T	I	L	R	M	M	T	D	P	A	R	.	.	.	V	R	R	S	D	P	G	N	P	E
Template Known Secondary structure							S											.	.	.				S						T	T	S	S				G	G	.	.	.	G	T				B	T	T												T					T	T		.	.	.	S	S	T	T	S				G	G
Template Predicted Secondary structure																		.	.	.																			.	.	.																												.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																		.	.
Query SS confidence													.	.																		.	.
Query Sequence		V	S	N	L	L	D	I	L	S	A	V	.	.	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	.	.	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F	R	N	D	E	A	F	L	Q	Q	V	M	K	D	G	A	E	K	A	S	A	H	A	S
Query Conservation													.	.																		.	.
Alig confidence													.	.																		.	.
Template Conservation
Template Sequence		N	C	P	V	W	K	Y	H	Q	A	F	D	I	S	E	E	E	S	K	W	V	W	E	G	C	T	T	A	S	I	G	C	V	D	C	K	K	L	L	L	K	N	M	K	R	K	L	A	P	I	W	E	N	F	R	K	I	D	E	D	P	H	Y	V	D	D	V	I	M	E	G	T	K	K	A	R	E	V	A	A
Template Known Secondary structure		G										T	T															T	T		S																														S	T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	L	K	A	V	Y	E	A	I	G	F	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	M	E	E	V	R	R	A	M	N	L	M
Template Known Secondary structure											T	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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