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Job DescriptionP00954
Confidence100.00%DateThu Jan 5 10:57:18 GMT 2012
Rank8Aligned Residues310
% Identity41%Templatec2el7A_
PDB info PDB header:ligaseChain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from thermus2 thermophilus
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30... ......40.........50 .........60.........70.........
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Query Sequence  PIVFSGAQPSGELTIGNYMGALRQWVNMQD. . DYHCIYCIVDQHAITVR. . QDAQKLRKATLDTLALYLACGIDPEKSTI
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Template Sequence  KRVLSGIQPSGEIHIGNYLGAIKQWVAIGEKLGRDAFFCIVDYHALTNPLAYDPSTLAQRTFEAALVNIAAGLDPEKVTL
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S
S

BTGGG
GGGGGGSTTTS
T

TTTS
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Query Sequence  FVQSHVPEHAQLGWALNCYTYFGELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRD
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Template Sequence  FVQSHVPEHTELSWVFTTLTPLGDLTRMTQFKDKASK. QETVWSGLLMYPVLQAADILIYKADTVPVGEDQVQHIELTRE
Template Known Secondary structure  GGGSTTS
TSTTS.SS


TT



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Query Sequence  IAQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVKKIKRAVTDSDEPPVVRYDVQN
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Template Sequence  IARRFNHLFGETFPEPQALLNPEAPRVPGI. DGKAKMSKS. . . LGNTIGLLEPEESIWQKIQHLPDDPTI. . . . . . . . . .
Template Known Secondary structure  SS






TTS


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T.TSSSB

TT...TT


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   240.........250.........260.........270 .........280.........290.........300.........310.......
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Query Sequence  KAGVSNLLDILSAVTGQSIPELEKQFEGKMY. . GHLKGEVADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASAHA
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Template Sequence  . . . LFTYLSYFA. . PKDLVEALKEEYRKAGVGTYVVKRILFDHLMEALRPIRERAEALKKDPDYVMDALLEGAKRARAVA
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   240........ .250.........260.........270.........280.........290.........300.........310....
 
   318.320.........330...
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Query Sequence  SRTLKAVYEAIGFVAK
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Template Sequence  QATMEEVREKVGLLLP
Template Known Secondary structure  TT



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   315....320.........330
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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