Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 11 Aligned Residues 277 % Identity 22% Template c2cybA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with2 l-tyrosine from archaeoglobus fulgidus Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		T	K	P	I	V	F	S	G	A	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	.	D	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	K	S	T	I	F
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		E	K	P	R	A	Y	V	G	Y	E	P	S	G	E	I	H	L	G	H	M	M	T	V	Q	K	L	M	D	L	Q	E	A	G	F	E	I	I	V	L	L	A	D	I	H	A	Y	L	N	E	K	G	T	F	E	E	I	A	E	V	A	D	Y	N	K	K	V	F	I	A	L	G	L	D	E	S	R	A	K	F	V
Template Known Secondary structure		S												S			B																T	T															T	T																					T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	S	H	V	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	L	V	P	V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	S	E	Y	Q	L	S	R	D	Y	V	L	D	V	L	K	M	A	R	I	T	T	L	N	R	A	R	R	S	M	D	E	V	S	R	R	K	E	D	P	M	V	S	Q	M	I	Y	P	L	M	Q	A	L	D	I	A	H	L	G	V	D	L	A	V	G	G	I	D	Q	R	K	I	H	M	L	A	R	E	N
Template Known Secondary structure			G	G	G	T	T	T	S														S									T	T	T	T		S		S	S	S			T																T	T		S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	A	V	T	D	S	D	E	P	P	V	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.									.						.	.	.																															.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.									.						.	.	.
Template Sequence		L	P	R	L	G	Y	S	S	P	V	C	L	H	T	P	.	.	.	.	.	.	.	.	.	.	I	L	V	G	L	D	G	Q	.	K	M	S	S	S	.	.	.	K	G	N	Y	I	S	V	R	D	P	P	E	E	V	E	R	K	I	R	K	A	Y	C	P	A	G	V	V	E	E	N	P	I	L	D	I	A	K
Template Known Secondary structure		G	G	G	G	T											.	.	.	.	.	.	.	.	.	.			B		T	T	S	S	.	B			T	T	.	.	.	T	T		S		B	T	T												T	S				T	T			T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.									.						.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.											.	.	.	.	210	.	.	.		.	.	.	.	.				.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
			233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.																																							.	.
Query SS confidence		.																																							.	.
Query Sequence		.	V	R	Y	D	V	Q	N	K	A	G	V	S	N	L	L	D	I	L	S	A	V	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	.	.	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y
Query Conservation		.																																							.	.
Alig confidence		.																																							.	.
Template Conservation
Template Sequence		Y	H	I	L	P	R	F	G	K	I	V	V	E	R	D	A	K	F	G	G	D	V	E	Y	A	S	F	E	E	L	A	E	D	F	K	S	G	Q	L	H	P	L	D	L	K	I	A	V	A	K	Y	L	N	M	L	L	E	D	A	R	K	R	L
Template Known Secondary structure			T						S								G	G	G	T						S	S											T	S	S
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions