Job Description P00954 Confidence 100.00% Date Thu Jan 5 10:57:18 GMT 2012 Rank 22 Aligned Residues 277 % Identity 17% Template c1q11A_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of an active fragment of human tyrosyl-trna2 synthetase with tyrosinol Resolution 1.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.
Query Sequence		T	K	P	I	V	F	S	G	A	Q	P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	D	.	.	.	.	.	.	A	Q	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E
Query Conservation																																																					.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.
Template Conservation
Template Sequence		R	E	L	K	I	Y	W	G	T	A	T	T	G	K	P	H	V	A	Y	F	V	P	M	S	K	I	A	D	F	L	K	A	G	C	E	V	T	I	L	F	A	D	L	H	A	Y	L	D	N	M	K	A	P	W	E	L	L	E	L	R	V	S	Y	Y	E	N	V	I	K	A	M	L	E	S	I	G	V	P	L	E
Template Known Secondary structure		S										S		S			B	G	G	G													T	T															T	T		S	S																							T	T				T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	T	I	F	V	Q	S	H	V	P	E	H	A	Q	L	G	W	A	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	L	V	P	V	G	E	D	Q	K	Q	H	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	L	K	F	I	K	G	T	D	Y	Q	L	S	K	E	Y	T	L	D	V	Y	R	L	S	S	V	V	T	Q	H	D	S	K	K	A	G	A	E	V	V	K	Q	V	E	H	P	L	L	S	G	L	L	Y	P	G	L	Q	A	L	D	E	E	Y	L	K	V	D	A	Q	F	G	G	I	D	Q	R	K	I	F	T
Template Known Secondary structure		T						G	G	G	T	T	T	S												T	T	S									T	T	T	T	S				S	S																			T	T		S						G	G	G
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A	R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	D	P	K	S	V	V	K	K	I	K	R	A	V	T	D	S	D	E	P	P	V	V	R	Y
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Sequence		F	A	E	K	Y	L	P	A	L	G	Y	S	K	R	V	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	N	P	M	V	P	G	L	T	G	K	I	D	L	L	D	R	K	E	D	V	K	K	K	L	K	K	A	F	C	E	P	G	N	.	.	.	V	E	N
Template Known Secondary structure							T	G	G	G	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T				B	T	T											T	S	S	S			T	T		.	.	.		S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210																								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.													.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Query Sequence		D	V	Q	N	K	A	G	V	S	N	L	L	D	I	L	S	A	V	.	.	.	.	.	.	.	.	.	.	.	.	T	G	Q	S	I	P	E	L	E	K	Q	F	E	G	K	M	Y	.	.	G	H	L	K	G	E	V	A	D	A	V	S	G	M	L	T	E	L	Q	E	R	Y	H	R	F	R	N	D	E	A	F
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.																		.	.																									.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.
Template Sequence		N	G	V	L	S	F	I	K	H	V	L	F	P	L	K	S	E	F	V	I	L	R	D	E	K	W	G	G	N	K	T	Y	T	A	Y	V	D	L	E	K	D	F	A	A	E	V	V	H	P	G	D	L	K	N	S	V	E	V	A	L	N	K	L	L	D	P	I	R	E	K	F	N	T	.	.	.	.	.	P	A
Template Known Secondary structure											T						S	S							G	G	G	T						S	S										T	T		S																								T		S	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330						.	.
		302	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	Q	V	M	K	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	K	L	A	S	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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