Job Description P00954 Confidence 98.33% Date Thu Jan 5 10:57:18 GMT 2012 Rank 47 Aligned Residues 187 % Identity 21% Template c1g59A_ PDB info PDB header:ligase/rna Chain: A: PDB Molecule:glutamyl-trna synthetase; PDBTitle: glutamyl-trna synthetase complexed with trna(glu). Resolution 2.40 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.
Predicted Secondary structure																																													.																						.	.	.	.	.	.	.
Query SS confidence																																													.																						.	.	.	.	.	.	.
Query Sequence		P	S	G	E	L	T	I	G	N	Y	M	G	A	L	R	Q	W	V	N	M	Q	D	D	Y	H	C	I	Y	C	I	V	D	Q	H	A	I	T	V	R	Q	D	A	Q	.	K	L	R	K	A	T	L	D	T	L	A	L	Y	L	A	C	G	I	D	P	E	.	.	.	.	.	.	.	K	S	T	I	F	V	Q	S
Query Conservation																																													.																						.	.	.	.	.	.	.
Alig confidence																							.									.	.	.	.	.									.																						.	.	.	.	.	.	.
Template Conservation																							.									.	.	.	.	.
Template Sequence		P	T	G	D	P	H	V	G	T	A	Y	I	A	L	F	N	Y	A	W	A	R	.	R	N	G	G	R	F	I	V	.	.	.	.	.	R	I	E	D	T	D	R	A	R	Y	V	P	G	A	E	E	R	I	L	A	A	L	K	W	L	G	L	S	Y	D	E	G	P	D	V	A	A	P	T	G	P	Y	R	Q	S
Template Known Secondary structure			S	S	S		B																.		T	T						.	.	.	.	.		B					T	T	T			T	T												T	T				S	B		S	S	S			S	S	S		S	B	G	G
Template Predicted Secondary structure																							.									.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	V	P	E	H	A	Q	L	G	W	A	.	.	.	.	.	.	.	.	L	N	C	Y	T	Y	F	G	E	L	S	R	M	T	Q	F	K	D	K	S	A	R	Y	A	E	N	I	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	L	P	L	Y	Q	K	Y	A	E	E	L	L	K	R	G	W	A	Y	R	A	F	E	T	P	E	E	L	E	Q	I	R	K	E	K	G	G	Y	D	G	R	A	R	N	I	P	P	E	E	A	E	E	R	A	R	R	G	E	P	H	V	I	R	L	K	V	P	R	P	G	T	T	E	V	K	D	E	L	R
Template Known Secondary structure		G	G													T	T	T	S																		S	S	S				G	G	G	G	S											T	T											S	S								T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
																					124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	F	D	Y	P	V	L	M	A	A	D	I	L	L	Y	Q	T	N	L	V	P	V	G	E	D	Q	K	Q	H	L	E	L	S	R	D	I	A	Q	R	F	N	A	L	Y	G	E	I	F	K	V	P	E	P	F	I	P	K	S	G	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		G	V	V	V	Y	D	N	Q	E	I	P	D	V	V	L	L	K	S	D	G	Y	P	T	Y	H	L	A	N	V	V	D	D	H	L	M	G	V	T	D	V	I	R	A	E	E	W	L	V	S	T	P	I	H	V	L	L	Y	R	A	F	G	W	E	A	P	R	F	Y	H	M	P	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								G	G	G	S								T	T	S		B													T	T								G	G	G	T	T	T											T	T											.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.						.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		R	V	M	S	L	L	E	P	T	K	K	M	S	K	S	D	D	N	R	N	N	V	I	G	L	L	E	.	.	.	.	.	D	P	K	S	V	V	K
Query Conservation																													.	.	.	.	.
Alig confidence		.									.						.	.	.										.	.	.	.	.
Template Conservation		.									.						.	.	.
Template Sequence		.	L	L	R	N	P	D	K	T	.	K	I	S	K	R	.	.	.	K	S	H	T	S	L	D	W	Y	K	A	E	G	F	L	P	E	A	L	R	N
Template Known Secondary structure		.			B		T	T	S	S	.	B			T	T	.	.	.	T	S			B							T	T
Template Predicted Secondary structure		.									.						.	.	.
Template SS confidence
			235	.	.	.	.	240	.	.		.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions