Job Description P0ABZ1 Confidence 76.19% Date Thu Jan 5 11:16:43 GMT 2012 Rank 16 Aligned Residues 81 % Identity 12% Template c1hjpA_ PDB info PDB header:dna recombination Chain: A: PDB Molecule:ruva; PDBTitle: holliday junction binding protein ruva from e. coli Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure																										.	.	.	.	.																																				.
Query SS confidence																										.	.	.	.	.																																				.
Query Sequence		I	G	E	D	R	A	A	E	V	F	K	H	L	S	Q	R	E	V	Q	T	L	S	A	A	.	.	.	.	.	M	A	N	V	T	Q	I	S	N	K	Q	L	T	D	V	L	A	E	F	E	Q	E	A	E	Q	F	A	A	L	N	I	N	A	N	D	.	Y	L	R	S	V	L	V	K	A	L	G	E	E	R	A
Query Conservation																										.	.	.	.	.																																				.
Alig confidence																										.	.	.	.	.																																				.
Template Conservation
Template Sequence		V	G	P	K	L	A	L	A	I	L	S	G	M	S	A	Q	Q	F	V	N	A	V	E	R	E	E	V	G	A	L	V	K	L	P	G	I	G	K	K	T	A	E	R	L	I	V	E	M	K	D	R	F	K	G	L	H	G	D	L	F	D	A	E	Q	E	A	V	A	A	L	V	A	L	G	Y	K	P	Q	E	A
Template Known Secondary structure														S											T	T			S	T	T	T	S	S	T	T	T		S																T	S		S	S																T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		91	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	L	E	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	M	V	S	K	I
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions