Job Description P39165 Confidence 36.87% Date Thu Jan 5 11:58:19 GMT 2012 Rank 73 Aligned Residues 137 % Identity 15% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

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		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		V	G	V	G	Q	R	W	A	R	G	N	W	L	V	G	Y	N	T	F	Y	D	N	L	L	D	E	N	L	.	.	.	.	Q	R	A	G	F	G	A	E	A	W	G	E	Y	L	R	L	S	A	N	F	Y	Q	P	F	A	A	W	H	E	Q	T	A	T	Q	E	Q	R	M	A	R	G	Y	D	L	T	A	R	M
Query Conservation																														.	.	.	.
Alig confidence																														.	.	.	.																							.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		I	G	G	Y	V	A	Y	D	N	G	P	L	S	A	S	L	G	L	A	Q	Q	K	T	A	V	G	G	L	A	T	D	R	D	E	I	T	L	G	A	S	Y	N	F	G	V	A	K	L	S	G	L	L	Q	Q	.	.	.	.	T	K	F	K	R	D	I	G	G	D	I	K	T	N	S	Y	M	L	G	A	S	A
Template Known Secondary structure											S	S															T	T																	S	S										.	.	.	.						T	T	S
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.					.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.																					.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	M	P	F	Y	Q	H	L	N	T	S	V	S	L	E	Q	Y	F	G	D	R	V	D	L	F	N	S	G	T	G	Y	H	N	P	V	A	L	S	L	G	L	N	Y	T	P	V	P	L	V	T	V	T	A	Q	H	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	S
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.																			.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.																			.	.	.	.	.	.	.	.
Template Sequence		P	V	G	.	.	G	V	G	E	V	K	L	Q	Y	A	L	Y	D	Q	K	A	I	D	.	.	.	.	.	.	.	.	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	S	K	R	T	A	L	Y	G	N	L	A	F	L	K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A
Template Known Secondary structure				T	.	.	T	T													G	G	G	T	.	.	.	.	.	.	.	.														S	S	S	S														T	T							B	T	T	T	B		S				T
Template Predicted Secondary structure					.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.									.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	N	Q	N	N	L	G	L	N	L	N	Y	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	S	Q	T	G	V	Q	V	G	I	R	H	A	F
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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