 |
Job Description | P39165 | Confidence | 44.57% | Date | Thu Jan 5 11:58:19 GMT 2012 |
Rank | 58 | Aligned Residues | 94 |
% Identity | 14% | Template | d2fdbp2 |
SCOP info | Immunoglobulin-like beta-sandwich
| Immunoglobulin
| I set domains
|
Resolution | 2.28 |
|
 |
  |   |
348 | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | R | K | T | L | T | V | F | L | A | T | P | P | W | D | L | K | P | G | E | T | V | P | L | K | L | Q | I | R | S | R | Y | G | I | R | Q | L | I | W | Q | G | D | T | Q | I | L | S | L | T | P | G | A | Q | A | N | S | A | E | G | W | T | L | I | M | P | D | W | Q | N | G | E | G | A | S | N | H | W | R | L |
Query Conservation |   |
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|
|
|   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|   |   |   |   |
|   |   | . |   |   |
|   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   | . | . |   |   |   |   |   |
|   |
|   |
|   |
|
Template Sequence |   |
R | H | R | P | I | L | Q | A | G | L | P | A | N | . |
A | S | T | V | V | G | G | D | V | E | F | V | C | K | V | Y | S | D | A | Q | P | H | I | Q | W | I | K | H | V | Y | L | K | V | L | K | A | A | G | V | N | T | T | D | K | E | I | E | V | L | Y | I | R | . |
. |
N | V | T | F | E | D | A | G | E | Y | T | C |
Template Known Secondary structure |   |
| S |
|
|  |  |
| T | T |
| S |
|
| . |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |
| . | . | S |
|
| G | G | G |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|
|
|  | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2253 | . | . | . | . | . | . | 2260 | . | . | . | . | . | |
. | . | . | . | 2270 | . | . | . | . | . | . | . | . | . | 2280 | . | . | . | . | . | . | . | . | . | 2290 | . | . | . | . | . | . | . | . | . | 2300 | . | . | . | . | . | . | . | . | . | 2310 | . | . | . | . | . | . | . | |
|
. | . | 2320 | . | . | . | . | . | . | . | . | . |
  |
  |   |
428 | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | V | V | E | D | N | Q | G | Q | R | V | S | S | N | E | I | T | L |
Query Conservation |   |
|   |   |
|   |
|   |
|
|
|   |
|   |
|   |   |   |   |
|
Alig confidence |   |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   | . | . |
|   |   |
|   |   |   |   |   |   |   |
|   |
|
Template Sequence |   |
L | A | G | . |
. |
N | S | I | G | I | S | F | H | S | A | W | L | T | V |
Template Known Secondary structure |   |
 |  |  | . | . |
| S | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2343 | . | . | |
|
. | . | . | . | 2350 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|