Job Description P39165 Confidence 81.67% Date Thu Jan 5 11:58:19 GMT 2012 Rank 24 Aligned Residues 168 % Identity 11% Template d1uynx_ SCOP info Transmembrane beta-barrels Autotransporter Autotransporter Resolution 2.60

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		R	Y	L	T	W	S	Q	L	G	L	T	Q	Q	D	N	G	L	V	S	N	V	G	V	G	Q	R	W	A	R	G	N	W	L	.	.	V	G	Y	N	T	F	Y	D	N	L	L	D	E	N	L	Q	R	A	G	F	G	A	E	A	W	G	E	Y	L	R	L	S	A	N	F	Y	Q	P	F	A	A	W	H	E	Q
Query Conservation																																			.	.
Alig confidence																																			.	.																																	.	.
Template Conservation																																																																					.	.
Template Sequence		D	S	I	S	L	F	A	G	I	R	H	D	A	G	D	I	G	Y	L	K	G	L	F	S	Y	G	R	Y	K	N	S	I	S	R	S	T	G	A	D	E	H	A	E	G	S	V	N	G	T	L	M	Q	L	G	A	L	G	G	V	N	V	P	T	G	D	L	T	.	.	V	E	G	G	L	R	Y	D	L	L	K
Template Known Secondary structure															T	T	T																					S	S	S																													.	.
Template Predicted Secondary structure																																																																					.	.
Template SS confidence
		881	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.			.	.	950	.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.														.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	A	T	Q	E	Q	R	M	A	R	G	Y	D	L	T	A	R	M	R	M	P	F	Y	Q	H	L	N	T	S	V	S	L	E	Q	Y	F	G	D	R	V	D	L	F	N	S	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	G	Y	H	N	P	V	A	L	S	L	G	L	N	Y	T	P	V	P	L	V
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		Q	D	A	F	A	E	K	G	.	S	A	L	G	W	S	G	N	S	L	T	E	G	T	L	V	G	L	A	G	L	K	L	S	Q	P	L	S	D	K	A	V	L	F	A	T	A	G	V	E	R	D	L	N	G	R	D	Y	T	V	T	G	P	H	T	R	L	V	A	G	L	G	A	D	V	E	F	G	N	G	W
Template Known Secondary structure									S	.		T	T																									S	S	S													S	S																									T	T
Template Predicted Secondary structure										.
Template SS confidence
		962	.	.	.	.	.	.	.		970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040
		285	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		T	V	T	A	Q	H	.	K	Q	G	E	S	G	E	N	Q	N	N	L	G	L	N	L	N	Y	R	F
Query Conservation								.
Alig confidence								.
Template Conservation
Template Sequence		N	G	L	A	R	Y	S	Y	A	G	S	K	Q	Y	G	N	H	S	G	R	V	G	V	G	Y	R	F
Template Known Secondary structure													T	T
Template Predicted Secondary structure
Template SS confidence
		1058	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions