Return to main results Retrieve Phyre Job Id

Job DescriptionP39165
Confidence22.57%DateThu Jan 5 11:58:19 GMT 2012
Rank107Aligned Residues43
% Identity16%Templated1u2ca1
SCOP infoImmunoglobulin-like beta-sandwich Cadherin-like Dystroglycan, N-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   412... ....420.........430......... 440.........450....
Predicted Secondary structure 


............










....





Query SS confidence 



. . . . . . . . . . . .























. . . .














Query Sequence  MPDW. . . . . . . . . . . . QNGEGASNHWRLSVVVEDNQGQRV. . . . SSNEITLTLVEPFDA
Query Conservation 

 
............       
 
 

  
 
 


 
.... 
    
 

 
   
Alig confidence 



............























....














Template Conservation 




 

  
 





     
   
 




           
 

 
 
 

   
Template Sequence  LPSWLHWDPHSHILEGLPLDTDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHN
Template Known Secondary structure 

TTTTTT


GGG

TTS
SS


Template Predicted Secondary structure 



























Template SS confidence 


























































   102.......110.........120.........130.........140.........150.........160
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions