 |
Job Description | P39165 | Confidence | 45.16% | Date | Thu Jan 5 11:58:19 GMT 2012 |
Rank | 56 | Aligned Residues | 86 |
% Identity | 14% | Template | d1tiua_ |
SCOP info | Immunoglobulin-like beta-sandwich
| Immunoglobulin
| I set domains
|
Resolution | UNK |
|
 |
  |   |
352 | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | |
400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | T | V | F | L | A | T | P | P | W | D | L | K | P | G | E | T | V | P | L | K | L | Q | I | R | S | R | Y | G | I | R | Q | L | I | W | Q | G | D | T | Q | I | L | S | L | T | P | G | . |
A | Q | A | N | S | A | E | G | W | T | L | I | M | P | D | W | Q | N | G | E | G | A | S | N | H | W | R | L | S | V | V |
Query Conservation |   |
  |
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |
|   |
|
|
|   |
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|
|   | . |
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
  |
|   |
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |
|   |
|   |
| . | . |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   | . | . |   |   |   |   |   |
|   |
|   |
|   |
|   |
| . |
Template Sequence |   |
L | I | E | V | E | K | P | L | Y | G | V | E | V | F | V | G | E | T | A | H | F | E | I | E | L | . |
. |
S | E | P | D | V | H | G | Q | W | K | L | K | G | Q | P | L | T | A | S | P | D | C | E | I | I | E | D | G | K | K | H | I | L | I | L | H | . |
. |
N | C | Q | L | G | M | T | G | E | V | S | F | Q | A | . |
Template Known Secondary structure |   |
|
|
|
| S | B |
|
|
|
|  |  |  |  | T | T | S |
|
|
|  |  |  | B |
| . | . | S | S | S | S |
|
|
| B |
|
| S | S | S |
|
|
|
| S | S | S | S |
|  |  |  |  |
| S | S |
|  |  |  |  |
|
| . | . | S |
|
| S |
|
|
| S |  |  |
|
| B |
| . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |
|  |  |  |  |  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | |
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
  |
  |   |
431 | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | E | D | N | Q | G | Q | R | V | S | S | N | E | I | T | L | T |
Query Conservation |   |
|   |
|   |
|
|
|   |
|   |
|   |   |   |   |
|   |
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |   |
|   |   |   |   |
|   |
|   |
|   |
Template Sequence |   |
. |
. |
. |
. |
. |
A | N | A | K | S | A | A | N | L | K | V | K |
Template Known Secondary structure |   |
. | . | . | . | . | S | S |
| B |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
76 | . | . | . | 80 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|