Job Description P39165 Confidence 90.12% Date Thu Jan 5 11:58:19 GMT 2012 Rank 17 Aligned Residues 166 % Identity 14% Template d1t16a_ SCOP info Transmembrane beta-barrels Porins Outer membrane protein transport protein Resolution 2.60

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	L	G	L	T	Q	Q	D	N	G	L	V	S	N	V	G	V	G	Q	R	W	A	R	G	N	W	L	V	G	Y	N	T	F	Y	D	N	L	L	D	E	N	L	Q	R	A	G	F	G	A	E	A	W	G	E	Y	L	R	L	S	A	N	F	Y	Q	P	F	A	A	W	H	E	Q	T	A	T	Q	E	Q	R
Query Conservation
Alig confidence																							.											.	.	.	.
Template Conservation																							.											.	.	.	.
Template Sequence		K	I	A	H	L	N	G	N	Q	W	G	F	G	W	N	A	G	I	L	Y	E	.	L	D	K	N	N	R	Y	A	L	T	.	.	.	.	Y	R	S	E	V	K	I	D	F	K	G	N	Y	S	S	D	L	N	R	A	F	N	N	Y	G	L	P	I	P	T	A	T	G	G	A	T	Q	S	G	Y	L	T	L	N
Template Known Secondary structure																							.			T	T							.	.	.	.																	S		G	G	G	T	T	S			S	S					T	T
Template Predicted Secondary structure																							.											.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.										.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.
Query Sequence		M	A	R	G	Y	D	L	T	A	R	M	R	M	P	F	Y	Q	H	L	N	T	S	V	S	L	E	Q	Y	F	G	.	.	.	.	.	.	.	.	.	D	R	V	D	L	F	N	S	G	T	G	Y	H	N	P	V	A	L	S	L	G	L	N	Y	T	P	V	P	L	V	T	V	T	A	Q	H	K	Q	G	E	S
Query Conservation																																.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	E	M	W	E	V	S	G	Y	N	R	V	D	P	Q	W	A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L	K	A	T	S	T	S	G	D	T	L	F	Q	K	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T	Y	Y	Y	D	D	N	W	T	F	R	T	G	I	A	F	D	D	S
Template Known Secondary structure																T	T												G	G	G									T	T	S																									S	S	S
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		296	.	.	.													300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	N	Q	.	.	.	.	.	.	.	.	.	.	.	.	N	N	L	G	L	N	L	N	Y	R	F	G	V	P	L	K
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	V	P	A	Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	N	K	D	A	S
Template Known Secondary structure		S	S		T	T	T			S	S	S																S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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