Job Description P39165 Confidence 77.15% Date Thu Jan 5 11:58:19 GMT 2012 Rank 28 Aligned Residues 138 % Identity 12% Template d1i78a_ SCOP info Transmembrane beta-barrels OMPT-like Outer membrane protease OMPT Resolution 2.60

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	N	G	L	V	S	N	V	G	V	G	Q	R	W	A	R	G	N	W	L	.	V	G	Y	N	T	F	Y	D	N	L	L	D	E	N	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	G	F	G	A	E	A	W	G	E	Y	L	R	L	S	A	N	F	Y	Q	P
Query Conservation																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	E	P	N	Y	R	L	G	L	M	A	G	Y	Q	E	S	R	Y	S	F	T	A	R	G	G	S	Y	I	Y	S	S	E	E	G	F	R	D	D	I	G	S	F	P	N	G	E	R	A	I	G	Y	K	Q	R	F	K	M	P	Y	I	G	L	T	G	S	Y	R	Y	E	D	F	E	L	G	G	T	F	K	Y	S
Template Known Secondary structure				S	S																									B			T	T		S	S		B			B			T	T		S																						T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.												.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.						.	.																									.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.						.	.																									.	.	.
Query Sequence		F	A	A	W	H	E	Q	T	A	T	Q	E	Q	R	.	.	.	.	.	.	.	.	.	.	.	M	A	R	G	Y	.	.	D	L	T	A	R	M	R	M	P	F	Y	Q	H	L	N	T	S	V	S	L	E	Q	Y	F	.	.	.	G	D	R	V	D	L	F	N	S	G	T	G	Y	H	N	P	V	A	L	S	L
Query Conservation																.	.	.	.	.	.	.	.	.	.	.						.	.																									.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.						.	.																									.	.	.					.
Template Conservation																																																																	.
Template Sequence		G	W	V	E	S	S	D	N	D	E	H	Y	D	P	K	G	R	I	T	Y	R	S	K	V	K	D	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	V	T	P	N	A	K	V	Y	V	E	G	A	W	N	R	V	T	N	K	K	G	N	T	S	.	L	Y	D	H	N	N	N	T	S	D	Y	S	K	N	G	A
Template Known Secondary structure															S	S	S																										T	T																					.				T	T	T	T
Template Predicted Secondary structure																																																																	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	N	Y	T	P	V	P	L	V	T	V	T	A	Q	H	K
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		G	I	E	N	Y	N	F	.	I	T	T	A	G	L	K	Y	T
Template Known Secondary structure									.
Template Predicted Secondary structure									.
Template SS confidence
		281	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions