Job Description P39165 Confidence 89.83% Date Thu Jan 5 11:58:19 GMT 2012 Rank 18 Aligned Residues 148 % Identity 18% Template d1g90a_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution UNK

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.												.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	D	N	G	L	V	S	N	V	G	V	G	Q	R	W	A	R	G	N	W	L	V	.	.	.	.	.	.	.	.	.	.	.	G	Y	N	T	F	Y	D	N	L	L	D	E	N	L	Q	R	A	G	F	G	A	E	A	W	G	E	Y	L	R	L	S	A	N	F	Y	Q	P	F	A	A	W	H	E	Q	T	A	T
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.											.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	N	T	W	Y	T	G	A	K	L	G	F	S	Q	Y	H	D	T	G	F	I	N	N	N	G	P	T	H	E	N	Q	L	G	A	G	A	F	G	G	Y	Q	V	.	N	P	Y	V	G	F	E	M	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	D	F	L	G	R	M	P	Y	K	G	S	V	E	N
Template Known Secondary structure																			S	S	S			B	S	S					S	S													.	T	T	T								.	.	.	.	.	.	.	.	.	.	.	.					S		T	T		S	S
Template Predicted Secondary structure																																													.											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.													.	.	.	.	60	.	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		Q	E	Q	R	M	A	R	G	Y	D	L	T	A	R	M	R	M	P	F	Y	Q	H	L	N	T	S	V	S	L	E	Q	Y	F	G	D	.	.	.	R	V	D	L	F	N	S	G	T	G	Y	H	N	P	V	A	L	S	L	G	L	N	Y	T	P	V	P	L	V	T	V	T	A	Q	H	K	Q	G	E	S	G	E
Query Conservation																																					.	.	.
Alig confidence							.																														.	.	.
Template Conservation							.
Template Sequence		G	A	Y	K	A	.	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	F	R	A	D	T	K	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	F	T	N	N	I	G
Template Known Secondary structure		S					.													S	S	S	S																		S	B	T	T	B																					T	T
Template Predicted Secondary structure							.
Template SS confidence
		70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		298	.	300										.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.
Query Sequence		N	Q	N	.	.	.	.	.	.	.	.	.	N	L	G	L	N	L	N	Y	R	F	G	V	P
Query Conservation					.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	A	H	T	I	G	T	R	P	D	N	G	M	L	S	L	G	V	S	Y	R	F	G	Q	G
Template Known Secondary structure			B	T	T	T	T																		S	S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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