Return to main results Retrieve Phyre Job Id

Job DescriptionP39165
Confidence23.11%DateThu Jan 5 11:58:19 GMT 2012
Rank104Aligned Residues86
% Identity13%Templated1biha1
SCOP infoImmunoglobulin-like beta-sandwich Immunoglobulin I set domains
Resolution3.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   358.360.........370.........380.........390.........400.........410.........420.........430.......
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  ATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEDNQGQ
Query Conservation        
  

   
   
 


 
  
 
  
   
  

 
         
 

 
       
 
 

  
 
 


Alig confidence 


.



















































..














...



Template Conservation 
  .  
  
    
 
   
 
 
    
                      
 
 ..     
 
 
 
 
 ...
  
Template Sequence  PAE. VLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFL. . RPQASDEGHYQCFAE. . . TPAG
Template Known Secondary structure 
S.
TTS



S

SS
SSSB

TTTTT
TTS

S..S

GGG
...TT
Template Predicted Secondary structure 

.



















..


...


Template SS confidence 















































































   13.. ....20.........30.........40.........50.........60....... ..70.........80.. ....
 
   438.440.........
Predicted Secondary structure 
Query SS confidence 











Query Sequence  RVSSNEITLTLV
Query Conservation   
 
    
 

Alig confidence 











Template Conservation     
    
  
Template Sequence  VASSRVISFRKT
Template Known Secondary structure 



Template Predicted Secondary structure 

Template SS confidence 











   87..90........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions