Job Description P39165 Confidence 39.80% Date Thu Jan 5 11:58:19 GMT 2012 Rank 67 Aligned Residues 93 % Identity 12% Template c3s37X_ PDB info PDB header:immune system/transferase Chain: X: PDB Molecule:vascular endothelial growth factor receptor 2; PDBTitle: structural basis for the function of two anti-vegf receptor antibodies Resolution 2.70 Å

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.										.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																	.																								.	.	.	.	.	.	.	.	.
Query SS confidence																																	.																								.	.	.	.	.	.	.	.	.
Query Sequence		L	T	V	F	L	A	T	P	P	W	D	L	K	P	G	E	T	V	P	L	K	L	Q	I	R	S	R	Y	G	I	R	.	Q	L	I	W	Q	G	D	T	Q	I	L	S	L	T	P	G	A	Q	A	N	S	A	E	.	.	.	.	.	.	.	.	.	G	W	T	L	I	M	P	D	W	Q	N	G	E	G	A	S
Query Conservation																																	.																								.	.	.	.	.	.	.	.	.
Alig confidence										.																							.																								.	.	.	.	.	.	.	.	.								.	.
Template Conservation										.																																																															.	.
Template Sequence		V	V	L	S	P	S	H	G	.	I	E	L	S	V	G	E	K	L	V	L	N	C	T	A	R	T	E	L	N	V	G	I	D	F	N	W	E	Y	P	S	S	K	H	Q	H	K	K	L	V	N	R	D	L	K	T	Q	S	G	S	E	M	K	K	F	L	S	T	L	T	I	D	.	.	G	V	T	R	S	D	Q
Template Known Secondary structure						S		S		.					T	T													T	T										S		S	S			T	T	T	S	B		S	S							T	T											S	.	.	S			G	G	G
Template Predicted Secondary structure										.																																																															.	.
Template SS confidence
		226	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	W	R	L	S	V	V	V	E	D	N	Q	G	Q	R	V	S	S	N	E	I	T	L	T	L	V	E
Query Conservation
Alig confidence										.	.
Template Conservation										.	.
Template Sequence		G	L	Y	T	C	A	A	S	.	.	S	G	L	M	T	K	K	N	S	T	F	V	R	V	H	E	K	P
Template Known Secondary structure										.	.		S	S													S
Template Predicted Secondary structure										.	.
Template SS confidence
		303	.	.	.	.	.	.	310			.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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