Job Description P39165 Confidence 94.57% Date Thu Jan 5 11:58:19 GMT 2012 Rank 8 Aligned Residues 142 % Identity 15% Template c3qraA_ PDB info PDB header:cell invasion Chain: A: PDB Molecule:attachment invasion locus protein; PDBTitle: the crystal structure of ail, the attachment invasion locus protein of2 yersinia pestis Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.
Query Sequence		D	N	G	L	V	S	N	V	G	V	G	Q	R	W	A	R	.	.	.	.	.	.	G	N	W	L	V	G	Y	N	T	F	Y	D	N	L	L	D	E	N	L	Q	R	A	G	F	G	A	E	A	W	G	E	Y	L	R	L	S	A	N	F	Y	Q	P	F	A	A	W	H	E	Q	T	A	T	Q	E	Q	R	M	A
Query Conservation																		.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																			.	.	.	.	.						.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																										.	.	.	.	.						.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		E	G	E	S	S	I	S	I	G	Y	A	Q	S	R	V	K	E	D	G	Y	K	L	D	K	N	P	R	G	F	N	L	K	Y	R	Y	E	F	N	N	D	.	.	.	.	.	W	G	V	I	G	.	.	.	.	.	.	.	.	.	.	S	F	A	Q	T	R	R	G	F	E	E	S	V	L	I	D	G	D	F	.
Template Known Secondary structure		T	T																T	T	S			B														S	S	S	S	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.																				.
Template Predicted Secondary structure																																										.	.	.	.	.						.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																					.	.																																														.
Query SS confidence																					.	.																																														.
Query Sequence		R	G	Y	D	L	T	A	R	M	R	M	P	F	Y	Q	H	L	N	T	.	.	S	V	S	L	E	Q	Y	F	G	D	R	V	D	L	F	N	S	G	T	G	Y	H	N	P	V	A	L	S	L	G	L	N	Y	T	P	V	P	L	V	T	V	T	A	Q	H	.	K	Q	G	E	S	G	E	N	Q	N	N	L	G
Query Conservation																					.	.																																														.
Alig confidence																					.	.																																														.
Template Conservation
Template Sequence		K	Y	Y	S	V	T	A	G	P	V	F	R	I	N	E	Y	V	S	L	Y	G	L	L	G	A	G	H	G	K	A	K	F	S	S	F	G	Q	S	E	S	R	S	K	T	S	L	A	Y	G	A	G	L	Q	F	N	P	H	P	N	F	V	I	D	A	S	Y	E	Y	S	K	L	D	D	V	K	V	G	T	W	M
Template Known Secondary structure															S	S	S																																								S	S	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		304	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	N	Y	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	G	A	G	Y	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions