 |
| Job Description | P39165 | | Confidence | 39.56% | Date | Thu Jan 5 11:58:19 GMT 2012 |
| Rank | 69 | Aligned Residues | 32 |
| % Identity | 16% | Template | c3ppeB_ |
| PDB info |
PDB header:cell adhesion | Chain: B: PDB Molecule:vascular endothelial cadherin; |
PDBTitle: crystal structure of chicken ve-cadherin ec1-2
|
| Resolution | 2.10 Å |
|
| | |
418 | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
|
|
|
|
|  | | | | | | | | | |  |
|
|
|
| | |
| | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
G | E | G | A | S | N | H | W | R | L | S | V | V | V | E | D | N | Q | G | Q | R | V | S | S | N | E | I | T | L | T | L | V |
| Query Conservation | |
| | | | |
| |
| |
|
| | |
| |
| |
|
|
| |
| |
| | | | |
| |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
| | | | |
| |
| |
| |
| |
| | |
| |
| | |
|
| | | |
| |
| |
| Template Sequence | |
D | R | E | S | Q | S | A | Y | E | I | I | V | K | A | K | D | A | L | G | L | T | G | E | S | S | T | A | T | V | I | I | R |
| Template Known Secondary structure | |
| T | T | T |
| S | | | | | | | | | | | T | T |
|
|
|
| T | T |
| | | | | | | |
| Template Predicted Secondary structure | |
|
|
|
|
|
| | | | | | | | | | |
|
|
|
|
|
| | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
