Job Description P39165 Confidence 57.52% Date Thu Jan 5 11:58:19 GMT 2012 Rank 40 Aligned Residues 89 % Identity 15% Template c3o3uN_ PDB info PDB header:transport protein, signaling protein Chain: N: PDB Molecule:maltose-binding periplasmic protein, advanced glycosylation PDBTitle: crystal structure of human receptor for advanced glycation endproducts2 (rage) Resolution 1.50 Å

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		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.											.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	D	L	K	P	G	E	T	V	P	L	K	L	Q	I	R	S	R	Y	G	I	R	Q	L	I	W	Q	G	D	T	Q	I	L	S	L	T	P	G	A	Q	A	N	S	A	E	G	W	.	.	.	.	.	.	.	.	.	.	T	L	I	M	P	D	W	Q	N	G	E	G	A	S	N	H	W	R	L	S	V	V	V
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.						.	.																.
Template Conservation																																																																.	.																.
Template Sequence		I	T	A	R	I	G	E	P	L	V	L	K	C	K	G	A	P	K	K	P	P	Q	R	L	E	W	K	L	N	T	G	R	T	E	A	W	K	V	L	S	P	Q	G	G	G	P	W	D	S	V	A	R	V	L	P	N	G	S	L	F	L	P	.	.	A	V	G	I	Q	D	E	G	I	F	R	C	Q	A	M	.
Template Known Secondary structure						T	T	S							T	T			S	S	S	S										T	T	S	S	S						S			S	S	G	G	G	G	T	S				T	T	S					S	.	.	S			G	G	G										.
Template Predicted Secondary structure																																																																.	.																.
Template SS confidence
		1026	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.			.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	N	Q	G	Q	R	V	S	S	N	E	I	T	L	T	L	V	E	P	F	D	A	L
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	N	R	N	G	K	E	T	K	S	N	Y	R	V	R	V	Y	Q	I	P	G	K	P
Template Known Secondary structure		.	.		T	T	S													B
Template Predicted Secondary structure		.	.
Template SS confidence
				1103	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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