Job Description P39165 Confidence 71.50% Date Thu Jan 5 11:58:19 GMT 2012 Rank 32 Aligned Residues 135 % Identity 14% Template c3dwoX_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue Resolution 2.20 Å

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		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.								180	.	.	.	.	.	.	.	.														.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																									.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		V	S	N	V	G	V	G	Q	R	W	A	R	G	N	W	L	V	G	Y	N	T	F	Y	.	.	.	.	.	.	.	D	N	L	L	D	E	N	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	G	F	G	A	E	A	W	G	.	E	Y	L	R	L	S	A	N	F	Y	Q	P	F	A	A	W	H
Query Conservation																									.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.											.
Alig confidence											.														.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation											.
Template Sequence		Y	A	S	L	D	W	V	H	Q	.	F	N	D	R	L	S	L	G	A	S	A	T	W	T	E	W	S	S	F	Q	D	L	T	L	K	S	H	G	N	T	I	V	S	I	P	Y	T	Y	R	N	T	W	T	L	A	V	G	G	D	Y	K	V	T	D	Q	W	T	M	R	A	G	V	A	Y	D	Q	T	P	T	H
Template Known Secondary structure											.		S	S	S												G	G	G									T	T																								S	S	S	S													S
Template Predicted Secondary structure											.
Template SS confidence
		287	.	.	290	.	.	.	.	.		.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		216	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		E	Q	T	A	.	.	T	Q	E	Q	R	M	A	R	G	Y	D	L	T	A	R	M	R	M	P	F	Y	Q	H	L	N	T	S	V	S	L	E	Q	Y	F	G	D	R	V	D	L	F	N	S	G	T	G	Y	H	N	P	V	A	L	S	L	G	L	N	Y	T	P	V	P	L	V	T	V	T	A	Q	H	K	Q	G
Query Conservation						.	.
Alig confidence						.	.																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	T	R	D	P	R	I	P	D	G	D	R	Y	F	A	S	L	G	A	G	Y	R	F	Q	S	M	P	E	L	S	I	D	A	A	Y	S	R	Q	F	V	K	E	V	P	L	K	T	V	N	Q	D	R	L	G	G	G	R	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure		T	T	T			S	S	S																	S	S	S	S	S																				B			G	G	G	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.																				.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	S	G	E	N	Q	N	N	L	G	L	N	L	N	Y	R	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	T	S	K	G	Q	V	F	S	L	S	A	T	Y	D	F	H
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions