Job Description P39165 Confidence 87.31% Date Thu Jan 5 11:58:19 GMT 2012 Rank 23 Aligned Residues 183 % Identity 10% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		W	G	N	A	S	V	D	V	K	V	D	N	E	G	H	F	T	G	S	R	G	S	W	F	V	P	L	Q	D	N	D	R	Y	L	T	W	S	Q	L	G	L	T	Q	Q	D	N	G	L	V	S	N	V	G	V	G	Q	R	W	A	R	G	N	W	L	V	G	Y	N	T	F	Y	D	N	L	L	D	E	N	L	.
Query Conservation																																																																																	.
Alig confidence									.																																																																								.
Template Conservation									.
Template Sequence		Y	T	D	T	D	A	S	.	A	D	L	Y	S	G	K	T	K	S	W	G	G	G	F	Y	A	S	G	L	F	R	S	G	A	Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	N	F	A	G	A	G	K	Q	N	F	R	S	H	S	L	Y	A	G	A	E	V	G	Y	R	Y	H	L	T	D	T
Template Known Secondary structure									.		T	T																			T	T	S																			S	S	T	T																									T	T
Template Predicted Secondary structure									.
Template SS confidence
		1163	.	.	.	.	.	.		1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	A	G	F	G	A	E	A	W	G	E	Y	L	R	L	S	A	N	F	Y	Q	P	F	A	A	W	H	E	Q	T	A	T	Q	E	Q	R	M	A	R	G	Y	D	L	T	A	R	M	R	M	P	F	Y	Q	H	L	N	T	S	V	S	L	E	Q	Y	F	G	D	R	V	D	L	F	N	S	G	T	G	Y	H
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	N	S	V	N	P	L	V	G	R	T	G	V	V	S	G	K	T	F	S	.	.	.	.	.	G	K	D	W	S	L	T	A	R	A	G	L	H	Y	E	F	D	L	T	D	S	R	K	D
Template Known Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.		S	S																S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		1242	.	.	.	.	.	.	.	1250	.	.	.	.	.	.																.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.						.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.
		268	.	270	.	.	.	.	.	.	.	.			.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		N	P	V	A	L	S	L	G	L	N	Y	.	.	T	P	V	P	L	V	T	V	T	A	Q	H	K	Q	G	E	S	G	E	N	Q	N	N	L	G	L	N	L	N	Y	R	F	G	V
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		S	R	M	L	Y	G	V	G	L	N	A	R	F	G	D	N	T	R	L	G	L	E	V	E	R	S	A	F	G	K	Y	N	T	D	D	A	I	N	A	N	I	R	Y	S	F	L	E
Template Known Secondary structure															T	T	T												S		S	S
Template Predicted Secondary structure
Template SS confidence
		1333	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions