Job Description P39165 Confidence 53.29% Date Thu Jan 5 11:58:19 GMT 2012 Rank 45 Aligned Residues 118 % Identity 17% Template c2xwxB_ PDB info PDB header:chitin-binding protein Chain: B: PDB Molecule:glcnac-binding protein a; PDBTitle: vibrio cholerae colonization factor gbpa crystal structure Resolution 1.80 Å

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		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350		.	.	.	.	.	.	.									.	.	360	.	.	.	.	.	.	.	.									.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																								.								.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query SS confidence																								.								.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Query Sequence		L	R	G	S	R	Y	D	N	P	Q	R	N	N	L	P	T	L	E	Y	R	Q	R	.	K	T	L	T	V	F	L	.	.	.	.	.	.	.	.	A	T	P	P	W	D	L	K	P	G	E	.	.	.	.	.	.	.	.	T	V	P	L	K	L	Q	I	R	S	R	Y	G	I	R	Q	L	I	W	Q	G	D	T
Query Conservation																								.								.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Alig confidence																								.								.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	N	G	D	Q	F	V	P	V	Y	G	T	N	P	I	Y	L	K	E	G	S	G	L	K	S	V	E	I	G	Y	Q	I	E	A	P	Q	P	E	Y	S	L	T	V	S	G	L	A	K	E	Y	E	I	G	E	Q	P	I	Q	L	D	L	T	L	E	A	Q	G	E	M	S	A	E	L	T	V	Y	N	H	H	Q
Template Known Secondary structure				T	T						S	S								T	T	S	S																										S						S	S												S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	L	S	L	T	P	G	A	Q	A	N	S	A	E	G	W	T	L	I	M	P	D	W	Q	N	G	E	G	A	S	N	H	W	R	L	S	V	V	V	E	D	N	Q	G	Q	R	V	S	S	N	E	I	T	L	T	L	V	E
Query Conservation
Alig confidence																		.													.	.	.
Template Conservation																		.													.	.	.
Template Sequence		K	P	L	A	S	W	S	Q	A	M	T	D	G	E	L	K	.	S	I	T	L	E	L	S	E	A	K	A	G	.	.	.	H	H	M	L	V	S	R	I	K	D	R	D	G	N	L	Q	D	Q	Q	T	L	D	F	M	L	V	E
Template Known Secondary structure													T	T				.							S				S		.	.	.											T	T	S
Template Predicted Secondary structure																		.													.	.	.
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.				.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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