Job Description P39165 Confidence 91.60% Date Thu Jan 5 11:58:19 GMT 2012 Rank 15 Aligned Residues 143 % Identity 19% Template c2k0lA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr structure of the transmembrane domain of the outer2 membrane protein a from klebsiella pneumoniae in dhpc3 micelles. Resolution UNK

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		169	170	.	.	.	.	.	.	.															.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Query Sequence		G	N	W	L	V	G	Y	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	D	N	L	L	D	E	N	L	Q	R	A	G	F	G	A	E	A	.	.	.	W	G	E	Y	L	R	L	S	A	N	F	Y	Q	P	F	A	A	W	H	E	Q	T	A	T	Q	E	Q	R	M	A	R	G	Y	D	L
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		N	T	W	Y	A	G	G	K	L	G	W	S	Q	Y	H	D	T	G	F	Y	G	N	G	F	Q	N	N	N	G	P	T	R	N	D	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	L	G	F	E	M	G	Y	D	W	L	G	R	M	A	Y	K	G	S	V	D	N	G	A	F	K	A	Q	G	V	Q	L
Template Known Secondary structure													S					S						S				S				S																	T	T																		S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.									.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																										.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.																														.	.	.
Query Sequence		T	A	R	M	R	M	P	F	Y	Q	H	L	N	T	S	V	S	L	E	Q	Y	F	G	D	R	V	D	L	F	N	S	G	T	G	Y	H	N	P	V	A	.	.	.	.	.	.	.	.	L	S	L	G	L	N	Y	T	P	V	P	L	V	T	V	T	A	Q	H	K	Q	G	E	S	G	E	N	Q	N	.	.	.
Query Conservation																																										.	.	.	.	.	.	.	.																														.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	S	K	G	N	Y	A	S	T	G	V	S	R	S	E	H	D	T	G	V	S	P	V	F	A	G	G	V	E	W	A	V	T	R	D	I	A	T	R	L	E	Y	Q	W	V	N	N	I	G	D	A	G	T	V	G
Template Known Secondary structure									S	S	S	S																			S				S	S	S																						S	S	S								S	S		S	S					S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
								301	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	N	L	G	L	N	L	N	Y	R	F	G
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		T	R	P	D	N	G	M	L	S	L	G	V	S	Y	R	F	G
Template Known Secondary structure			S	S		S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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