Job Description P39165 Confidence 90.85% Date Thu Jan 5 11:58:19 GMT 2012 Rank 16 Aligned Residues 141 % Identity 14% Template c2jmmA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein a; PDBTitle: nmr solution structure of a minimal transmembrane beta-2 barrel platform protein Resolution UNK

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	N	G	L	V	S	N	V	G	V	G	Q	R	W	A	R	G	N	W	L	V	G	Y	N	T	F	Y	D	N	L	L	D	E	N	L	Q	R	A	G	F	G	A	E	A	W	G	E	Y	L	R	L	S	A	N	F	Y	Q	P	F	A	A	W	H	E	Q	T	A	T	Q	E	Q	R	M	A	R	G	Y	D	L
Query Conservation
Alig confidence																																					.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	N	T	W	Y	T	G	A	K	L	G	W	S	Q	Y	S	R	E	N	Q	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	.	.	.	.	.	V	G	F	E	M	G	Y	D	W	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	M	P	R	K	A	Q	G	V	Q	L	T	A
Template Known Secondary structure			S	S												T	T			S	S													S	S	S	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	S
Template Predicted Secondary structure																																					.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.																	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		232	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.									.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure												.	.															.	.	.	.	.	.	.	.
Query SS confidence												.	.															.	.	.	.	.	.	.	.
Query Sequence		T	A	R	M	R	M	P	F	Y	Q	.	.	H	L	N	T	S	V	S	L	E	Q	Y	F	G	D	.	.	.	.	.	.	.	.	R	V	D	L	F	N	S	G	T	G	Y	H	N	P	V	A	L	S	L	G	L	N	Y	T	P	V	P	L	V	T	V	T	A	Q	H	K	Q	G	E	S	G	E	N	Q	N	N
Query Conservation												.	.															.	.	.	.	.	.	.	.
Alig confidence												.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	G	Y	P	K	L	G	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W	R	A	D	T	S	D	K	D	G	N	G	Y	I	S	A	A	E	A	S	V	S	P	V	F	A	G	G	V	E	Y	V	I	R	R	R	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	N	A	S	D	N	G	M
Template Known Secondary structure							T	T		T	T	T													S	S	B						S	S	S						B																S	S	S		S	S	S											S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		302	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	N	L	N	Y	R	F	G	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	L	G	V	S	Y	R	F	G	Q	G
Template Known Secondary structure										S		S	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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