Job Description P39165 Confidence 37.38% Date Thu Jan 5 11:58:19 GMT 2012 Rank 72 Aligned Residues 99 % Identity 10% Template c2jjsB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:tyrosine-protein phosphatase non-receptor type PDBTitle: structure of human cd47 in complex with human signal2 regulatory protein (sirp) alpha Resolution 1.85 Å

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		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.																.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	T	L	T	V	F	L	A	T	P	P	W	D	L	K	P	G	E	T	V	P	L	K	L	Q	I	R	S	R	Y	G	I	R	Q	L	I	W	Q	G	D	T	Q	I	L	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	G	A	Q	A	N	S	A	E	G	W	T	L	I	M	P	D
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																																																																																	.
Template Sequence		E	E	E	L	Q	V	I	Q	P	D	K	S	V	S	V	A	A	G	E	S	A	I	L	H	C	T	V	T	S	L	I	P	V	G	P	I	Q	W	F	R	G	A	G	P	A	R	E	L	I	Y	N	Q	K	E	G	H	F	P	R	V	T	T	V	S	E	S	T	K	R	E	N	M	D	F	S	I	S	I	S	.
Template Known Secondary structure												S						T	T	S									S				S	S								S	S	S	T	T							S	S	T	T	S		T	T				S	S		T	T	S	T	T			B							.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430				.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure																		.	.	.
Query SS confidence																		.	.	.
Query Sequence		W	Q	N	G	E	G	A	S	N	H	W	R	L	S	V	V	.	.	.	V	E	D	N	Q	G	Q	R	V	S	S	N	E	I	T	L	T	L	V	E
Query Conservation																		.	.	.
Alig confidence		.																.	.	.
Template Conservation		.
Template Sequence		.	N	I	T	P	A	D	A	G	T	Y	Y	C	V	K	F	R	K	G	S	P	D	T	E	F	K	S	G	A	G	T	E	L	S	V	R	A	K	P
Template Known Secondary structure		.	S			G	G	G												S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions