Job Description P39165 Confidence 50.54% Date Thu Jan 5 11:58:19 GMT 2012 Rank 48 Aligned Residues 86 % Identity 22% Template c2ensA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:advanced glycosylation end product-specific PDBTitle: solution structure of the third ig-like domain from human2 advanced glycosylation end product-specific receptor Resolution UNK

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		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	F	L	A	T	P	P	W	D	L	K	P	G	E	T	V	P	L	K	L	Q	I	R	S	R	Y	G	I	R	Q	L	I	W	Q	G	D	T	Q	I	L	S	L	T	P	G	A	Q	A	N	S	A	E	G	W	T	L	I	M	P	D	W	Q	N	G	E	G	A	S	N	H	W	R	L	S	V	V	V	E
Query Conservation
Alig confidence																												.																.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation																												.																.	.	.	.	.	.	.	.												.	.	.	.
Template Sequence		V	Q	L	V	V	E	P	E	G	G	A	V	A	P	G	G	T	V	T	L	T	C	E	V	P	A	.	Q	P	S	P	Q	I	H	W	M	K	D	G	V	P	L	.	.	.	.	.	.	.	.	P	L	P	P	S	P	V	L	I	L	P	.	.	.	.	E	I	G	P	Q	D	Q	G	T	Y	S	C	V	A	T
Template Known Secondary structure								S	T	T	S				T	T										S	S	.		S	S								S	S	S	B		.	.	.	.	.	.	.	.	S	S				S						.	.	.	.	S			T	T	T
Template Predicted Secondary structure																												.																.	.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.									.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	Q	G	Q	R	V	S	S	N	E	I	T	L	T	L	V	E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	S	S	H	G	P	Q	E	S	R	A	V	S	I	S	I	I	E	P
Template Known Secondary structure			S	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions