Job Description P39165 Confidence 51.36% Date Thu Jan 5 11:58:19 GMT 2012 Rank 46 Aligned Residues 83 % Identity 13% Template c2e7bA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:obscurin; PDBTitle: solution structure of the 6th ig-like domain from human2 kiaa1556 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	P	P	W	D	L	K	P	G	E	T	V	P	L	K	L	Q	I	R	S	R	Y	G	I	R	Q	L	I	W	Q	G	D	T	Q	I	L	S	L	T	P	G	A	Q	A	N	S	A	E	G	W	T	L	I	M	P	D	W	Q	N	G	E	G	A	S	N	H	W	R	L	S	V	V	V	E	D	N	Q	G	Q
Query Conservation
Alig confidence					.																		.																																			.	.															.	.	.	.	.	.
Template Conservation					.																		.																																			.	.															.	.	.	.	.	.
Template Sequence		L	K	D	.	L	E	V	L	E	G	G	A	A	T	L	R	C	V	L	S	S	.	V	A	A	P	V	K	W	C	Y	G	N	N	V	L	R	P	G	D	K	Y	S	L	R	Q	E	G	A	M	L	E	L	V	V	R	.	.	N	L	R	P	Q	D	S	G	R	Y	S	C	S	F	.	.	.	.	.	.	G	D
Template Known Secondary structure					.					S	S	S									S	S	.				S						S	S	S	B				S	S	S							S	S								.	.	S			T	T	T									.	.	.	.	.	.	S	S
Template Predicted Secondary structure					.																		.																																			.	.															.	.	.	.	.	.
Template SS confidence
		15	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.							.	.
		438	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	S	S	N	E	I	T	L	T	L	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	T	T	S	A	T	L	T	V	T	A	L	P
Template Known Secondary structure			B			B
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions