Return to main results Retrieve Phyre Job Id

Job DescriptionP39165
Confidence37.87%DateThu Jan 5 11:58:19 GMT 2012
Rank70Aligned Residues100
% Identity13%Templatec2cr6A_
PDB info PDB header:contractile proteinChain: A: PDB Molecule:kiaa1556 protein; PDBTitle: solution structure of the ig domain (2998-3100) of human2 obscurin
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   353......360.........370.........380.........390.........400.........410.........420.........430..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  LTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVE
Query Conservation 
 
 
      
  

   
   
 


 
  
 
  
   
  

 
         
 

 
       
 
 

  
 
Alig confidence 





























.













































...
Template Conservation 
 
   
    
 

  
 
 
 

     . 
 
      
                 
 
  
   
 
 
 
 
...
Template Sequence  VHIIEDLEDVDVQEGSSATFRCRISPANYE. PVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFEA. . .
Template Known Secondary structure 



TTS



STT

.S
SS


SSS

B

BTTTB

B
S

TTT
...
Template Predicted Secondary structure 













.















...
Template SS confidence 















































































   14.....20.........30.........40... ......50.........60.........70.........80.........
 
   433......440.........450.........
Predicted Secondary structure 














Query SS confidence 


























Query Sequence  DNQGQRVSSNEITLTLVEPFDALSNDE
Query Conservation 
 


 
 
    
 

 
        
Alig confidence  ...























Template Conservation  ...      
 
 
   
       
 
Template Sequence  . . . GDQRASAALRVTEKPSVFSRSGPS
Template Known Secondary structure  ...TT



SS

SSS
SS
Template Predicted Secondary structure  ...











Template SS confidence 


























   90.........100.........110...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions