Job Description P39165 Confidence 21.48% Date Thu Jan 5 11:58:19 GMT 2012 Rank 110 Aligned Residues 88 % Identity 15% Template c1hngB_ PDB info PDB header:t lymphocyte adhesion glycoprotein Chain: B: PDB Molecule:cd2; PDBTitle: crystal structure at 2.8 angstroms resolution of a soluble2 form of the cell adhesion molecule cd2 Resolution 2.80 Å

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		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.									.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																	.																																.	.	.	.	.	.	.	.
Query SS confidence																	.																																.	.	.	.	.	.	.	.
Query Sequence		P	W	D	L	K	P	G	E	T	V	P	L	K	L	Q	.	I	R	S	R	Y	G	I	R	Q	L	I	W	Q	G	D	T	Q	I	L	S	L	T	P	G	A	Q	A	N	S	A	E	.	.	.	.	.	.	.	.	G	W	T	L	I	M	P	D	W	Q	N	G	E	G	A	S	N	H	W	R	L	S	V	V	V
Query Conservation																	.																																.	.	.	.	.	.	.	.
Alig confidence																	.																																.	.	.	.	.	.	.	.												.	.									.	.
Template Conservation																																																																				.	.									.	.
Template Sequence		T	V	W	G	A	L	G	H	G	I	N	L	N	I	P	N	F	Q	M	T	D	D	I	D	E	V	R	W	E	R	G	S	T	L	V	A	E	F	K	R	K	M	K	P	F	L	K	S	G	A	F	E	I	L	A	N	G	D	L	K	I	K	N	L	T	R	.	.	D	D	S	G	T	Y	N	V	.	.	T	V
Template Known Secondary structure							T	T	S							T	T					T	T									T	T								S	S	S					S	S	T	T					T	T	S					S	S			G	.	.	G	G							.	.
Template Predicted Secondary structure																																																																				.	.									.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.			.	80
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	N	Q	G	Q	R	V	S	S	N	E	I	T	L	T	L	V	E	P	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	T	N	G	T	R	I	L	N	K	A	L	D	L	R	I	L	E	M	V
Template Known Secondary structure				S	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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