Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADK0
Confidence10.06%DateThu Jan 5 11:21:12 GMT 2012
Rank29Aligned Residues59
% Identity15%Templated1y9ua_
SCOP infoPeriplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like
Resolution1.39

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40. ........50...... ...60.........70.........80.....
Predicted Secondary structure 



.....











....


Query SS confidence 














. . . . .














. . . .




























Query Sequence  FDKEGDQRKAFIDFL. . . . . QNTVMRSGERLPTLT. . . . ADQKKQFGPFVSDYAILYGYSQQVNQAMD
Query Conservation 











 

.....
  
   

 

 

....  





 

 




  


    
  
Alig confidence 














.....














....




























Template Conservation   
   


  

 

 
 
 
   
   
  
    
                               
Template Sequence  HAPNKANAVKLLEYLVSEPAQTLYAQANYEYPVRAGVKLDAVVASFGPLKVDTLPVAEIAKYRKQASE
Template Known Secondary structure  T
TTTSTT
SSTT



T



B

S
T
Template Predicted Secondary structure 





























Template SS confidence 



































































   247..250.........260.........270.........280.........290.........300.........310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions