Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADK0
Confidence7.02%DateThu Jan 5 11:21:12 GMT 2012
Rank39Aligned Residues104
% Identity14%Templatec2zykA_
PDB info PDB header:sugar binding proteinChain: A: PDB Molecule:solute-binding protein; PDBTitle: crystal structure of cyclo/maltodextrin-binding protein2 complexed with gamma-cyclodextrin
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40. ........50.........60.........70.........80.........90.........100.
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Query Sequence  FDKEGDQRKAFIDFL. . . . . QNTVMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVP
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Template Sequence  YSKYPKYATELMQFLTSKEALASRFKETGEIPPQKELLND. . . PMIKNNPVVNGFAKQASKGVPMPSIPEMGVVWEP. . .
Template Known Secondary structure  T
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   289290.........300.........310.........320........ .330.........340.........350.........360..
 
   102.......110.........120.........130.........140.
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Query Sequence  QDYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQ
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Template Sequence  . . . . . INNAHTFVAQGKQTPEQALNDAVKIMKEKIQTMKQ
Template Known Secondary structure  .....TTSS


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   363......370.........380.........390.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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