Job Description P77433 Confidence 6.07% Date Thu Jan 5 12:29:16 GMT 2012 Rank 81 Aligned Residues 85 % Identity 18% Template c3iuyB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:probable atp-dependent rna helicase ddx53; PDBTitle: crystal structure of ddx53 dead-box domain Resolution 2.40 Å

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		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.											.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	L	F	S	A	A	E	R	G	R	S	L	S	L	L	P	E	.	.	.	.	.	.	.	.	.	.	Y	S	L	F	I	L	R	K	S	T	I	L	P	R	V	A	Q	L	A	E	K	L	H	Q	K	A	Q	A	G	E	R	M	P	S	C	I	N	I	I	S	G	P	S	S	T	A	D	I	E	L	I	K
Query Conservation																				.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																																.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		L	I	V	V	A	Q	T	G	T	G	K	T	L	S	Y	L	M	P	G	F	I	H	L	D	S	N	G	P	G	M	L	V	L	T	P	T	R	E	L	A	L	H	V	E	A	E	C	S	K	Y	S	Y	K	G	L	K	S	I	C	I	Y	G	V	D	I	I	I	A	T	P	G	R	L	N	D	.	.	.	L	Q
Template Known Secondary structure								T	T	S															T					S						S	S																	T	T										S												.	.	.
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.				.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	G	V	H	G	P	V	K	A	V	Y	L	I	I	E	D	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	N	N	S	V	N	L	R	S	I	T	Y	L	V	I	D	E	A
Template Known Secondary structure			T	T		S			T	T
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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