Job Description P77433 Confidence 17.91% Date Thu Jan 5 12:29:16 GMT 2012 Rank 20 Aligned Residues 51 % Identity 8% Template c3co5B_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative two-component system transcriptional response PDBTitle: crystal structure of sigma-54 interaction domain of putative2 transcriptional response regulator from neisseria gonorrhoeae Resolution 2.40 Å

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		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	L	A	E	K	L	H	Q	K	A	Q	A	G	E	R	M	P	S	C	I	N	I	I	S	G	P	S	S	T	A	D	I	E	L	I	K	V	V	G	V	H	G	P	V	K	A	V	Y	L	I	I	E	D	C
Query Conservation
Alig confidence																				.	.	.	.	.
Template Conservation																				.	.	.	.	.
Template Sequence		I	Q	E	X	N	R	E	V	E	A	A	A	K	R	T	S	P	V	.	.	.	.	.	F	L	T	G	E	A	G	S	P	F	E	T	V	A	R	Y	F	H	K	N	G	T	P	W	V	S	P	A	R	V	E	Y	L
Template Known Secondary structure														T		S	S			.	.	.	.	.						T	T									T	T			T	T	S						S	S	T	T
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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