 |
Job Description | P19932 | Confidence | 4.31% | Date | Thu Jan 5 11:37:41 GMT 2012 |
Rank | 72 | Aligned Residues | 82 |
% Identity | 20% | Template | c2d1eA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:phycocyanobilin:ferredoxin oxidoreductase; |
PDBTitle: crystal structure of pcya-biliverdin complex
|
Resolution | 1.51 Å |
|
 |
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | L | A | H | E | L | L | A | H | V | R | N | P | D | A | Q | P | H | S | I | N | L | T | Q | L | P | I | S | E | A | D | R | L | F | L | S | R | L | C | G | P | G | N | I | Q | I | R | T | I | G | Y | G | E | S | Y | I | N | A | T | G | L | R | H | V | W | H | L | R | C | T | D | T | L | K | G | P | L | L | E | S |
Query Conservation |   |
  |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |
|   |
|
|
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|   |   |
|
|   |   |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |
| . | . | . |   |
|   |
|   |   |   |
|   | . |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   | . | . | . | . | . |   |
|   |   |
|
|
| . |   |   |   |   |   |   |   |   |
|   | . | . |   |
|   |
|
Template Sequence |   |
P | M | I | Q | Q | L | A | L | A | I | A | A | S | W | Q | S | L | . |
. |
. |
P | L | K | P | Y | Q | L | P | E | . |
D | L | G | Y | V | E | G | R | L | E | G | E | K | L | V | I | E | N | R | C | Y | . |
. |
. |
. |
. |
Q | T | P | Q | F | R | K | . |
M | H | L | E | L | A | K | V | G | K | . |
. |
G | L | D | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | . | . | . |
|
|  |  |
|
|
| G | G | . | G |
|
|  |  |  |  |
| S | S | S |
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |  |
| S | S |  |  |  | . |  |  |  |  |  |  |  |  | T | T | . | . | T |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|
|
|
|
|
|
|
| . |
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|  |  |  | . |  |  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
. | . | . | . | 40 | . | . | . | . | |
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 70 | . | . | |
. | . | . | . | . | . | . | 80 | . | . | |
|
. | . | . | . |
  |
  |   |
249 | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | E | I | C | P | I | P | E | V | V | L | A | A | P |
Query Conservation |   |
|
|
|   |   |
|
|   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   |   |   |   |
|   |
|
Template Sequence |   |
L | H | C | V | M | F | P | E | P | L | Y | G | L | P |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
| G | G | G | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|