 |
Job Description | P19932 | Confidence | 9.05% | Date | Thu Jan 5 11:37:41 GMT 2012 |
Rank | 26 | Aligned Residues | 36 |
% Identity | 19% | Template | c1mszA_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:dna-binding protein smubp-2; |
PDBTitle: solution structure of the r3h domain from human smubp-2
|
Resolution | UNK |
|
  |   |
190 | . | . | . | . | |
. | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | Q | L | P | . |
I | S | E | A | D | R | L | F | L | S | R | L | C | G | P | G | N | I | Q | I | R | T | I | G | Y | G | E | S | Y | I | N |
Query Conservation |   |
|
|
|
|
| . |
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |
|   |
|   |
|
|
|
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|   |   |   |   |
|   |   |
|
|   |
|
|   |   |   |
|
|   |
|   |
|   |
|   |   |   |   |
|   |
|
Template Sequence |   |
L | E | F | P | P | S | L | N | S | H | D | R | L | R | V | H | Q | I | A | E | E | H | G | L | R | H | D | S | S | G | E | G | K | R | R | F | I |
Template Known Secondary structure |   |
 |  |  |
| T | T |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
| S | S | S |
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
744 | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|