Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABR5
Confidence100.00%DateThu Jan 5 11:16:07 GMT 2012
Rank12Aligned Residues322
% Identity16%Templatec3gteB_
PDB info PDB header:electron transport, oxidoreductaseChain: B: PDB Molecule:ddmc; PDBTitle: crystal structure of dicamba monooxygenase with non-heme2 iron
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110.........
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  GRCWLFLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRAFTCPYHGWSYGINGELI
Query Conservation   
 
  


 



 


  
  
    




  

 



 
 
 



 
     

   
 







 


 
 
Alig confidence 












..








































.






















Template Conservation 
  
  
  
 

..          
  


 
  

 
 
  
 





 
  
.      
 





 

 

   
Template Sequence  RNAWYVAALPEEL. . SEKPLGRTILDTPLALYRQPDGVVAALLDICPHRFAPLSDG. ILVNGHLQCPYHGLEFDGGGQCV
Template Known Secondary structure 
SS

GGG
..SSS
TT
TTS
SS
TTT


GGGS.TT
TTT


TTS
Template Predicted Secondary structure 




..


















.












Template SS confidence 















































































   6...10........ .20.........30.........40.........50......... 60.........70.........80..
 
   120.........130.........140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  DVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSAPGLRDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCN
Query Conservation   

          
     
  
 


   




  
     
 
 

      
                       
Alig confidence 




.....












.


































.........











Template Conservation   

  .....         
   .

 
  
 


            
           .........           
Template Sequence  HNPHG. . . . . NGARPASLNVRSF. PVVERDALIWIWPGDPALADPGAIPDFGCRVDPAY. . . . . . . . . RTVGGYGHVDCN
Template Known Secondary structure 

ST.....T



GGG


B
.
TT

S
GGG

GGGS


GGGG
TTS.........SS
Template Predicted Secondary structure 



.....












.





















.........

Template SS confidence 















































































   83.... ..90.........100 .........110.........120.........130..... ....140.......
 
   200.........210.........220.........230.........240.........250.........260.........270.........
Predicted Secondary structure 






























































Query SS confidence 















































































Query Sequence  WKFPAEQFASDQYHALFSHASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWVDGA
Query Conservation 


  


 

 

    
                                        


                  
Alig confidence 








.












































.........................
Template Conservation 

   

  .
  
   

                                    .........................
Template Sequence  YKLLVDNLM. DLGHAQYVHRANAQTDAFDRLEREVIVGDGEIQALMKIPGGTPSV. . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T.
GGGT

TTGGG

SS


.........................
Template Predicted Secondary structure  .



















.........................
Template SS confidence 















































































   148.150...... ...160.........170.........180.........190.........200.
 
   280.........290.........300.........310...... ...320.........330.........340.....
Predicted Secondary structure 









..............









Query SS confidence 




































. . . . . . . . . . . . . .




























Query Sequence  VSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWL. . . . . . . . . . . . . . NGTATLRVWHPRGPDQVEVWAFCITDKAA
Query Conservation                  
            




   ..............      
   
 


 


          
Alig confidence  ........




























..............




























Template Conservation  ........                       
          
                  
                  
Template Sequence  . . . . . . . . LMAKFLRGANTPVDAWNDIRWNKVSAMLNFIAVAPEGTPKEQSIHSRGTHILTPETEASCHYFFGSSRNFGI
Template Known Secondary structure  ........TTS

S
TTTTT

GGGSTTSSST
Template Predicted Secondary structure  ........





























Template SS confidence 















































































   202.......210.........220.........230.........240.........250.........260.........270...
 
   346...350.........360.........370.........380.........390.........400.........410.........420.....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  SDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKLCLEMGLGQEKRRDDGIPGITNYIFSETAARGMY
Query Conservation    
             



    

 
  
  
 
               
           

       
   
 
 
Alig confidence 














.....































....................







Template Conservation                 ..... 
  

  
 
  
                  ....................
      
Template Sequence  DDPEMDGVLRSWQAQ. . . . . ALVKEDKVVVEAIERRRAYVEANGIRPAMLSC. . . . . . . . . . . . . . . . . . . . DEAAVRVS
Template Known Secondary structure  T
.....TTTTTTT





GG....................G
Template Predicted Secondary structure 

.....












....................
Template SS confidence 















































































   274.....280........ .290.........300.........310.........320 ........
 
   426...430........
Predicted Secondary structure 



Query SS confidence 












Query Sequence  QRWADLLSSESWQ
Query Conservation    
   
      
Alig confidence 












Template Conservation 
          
 
Template Sequence  REIEKLEQLEAAR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 












   329330.........340.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions