Job Description P0ABR5 Confidence 100.00% Date Thu Jan 5 11:16:07 GMT 2012 Rank 13 Aligned Residues 347 % Identity 16% Template c3gkqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:terminal oxygenase component of carbazole 1,9a- PDBTitle: terminal oxygenase of carbazole 1,9a-dioxygenase from2 novosphingobium sp. ka1 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		L	E	L	E	R	I	F	G	R	C	W	L	F	L	A	H	E	S	Q	I	P	K	P	G	D	F	F	N	T	Y	M	G	E	D	A	V	V	V	V	R	Q	K	D	G	S	I	K	A	F	L	N	Q	C	R	H	R	A	M	R	V	S	Y	A	D	.	C	G	N	T	R	A	F	T	C	P	Y	H	G	W	S
Query Conservation																																																																		.
Alig confidence																							.																				.																							.
Template Conservation																							.																				.
Template Sequence		I	D	A	K	L	G	F	R	N	H	W	Y	P	V	R	L	S	A	E	V	A	.	E	A	S	P	V	P	V	Q	L	L	G	E	K	V	L	L	N	R	V	.	D	G	V	V	H	A	I	A	D	R	C	L	H	R	G	V	T	L	S	D	K	V	E	C	Y	S	K	A	T	I	S	C	W	Y	H	G	W	T
Template Known Secondary structure					T	T		B	S	S								G	G	G	S		.	B	T								T	T									.	T	T							S	S		T	T	T				G	G	G	S				S	B	T	T					T	T	T
Template Predicted Secondary structure																							.																				.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		112	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		Y	G	I	N	.	G	E	L	I	D	V	P	L	E	P	R	A	Y	P	Q	G	L	C	K	S	H	W	G	L	N	E	V	P	C	V	E	S	Y	K	G	L	I	F	G	N	W	D	T	S	A	P	G	L	R	D	Y	L	G	D	I	A	W	Y	L	D	G	M	L	D	R	R	E	G	G	T	E	I	V	G	G
Query Conservation						.
Alig confidence						.													.	.	.	.													.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.													.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	W	D	N	G	K	L	V	D	I	L	T	N	P	T	S	.	.	.	.	V	Q	I	G	R	H	A	L	K	T	Y	P	.	V	R	E	E	K	G	L	V	F	L	F	V	G	D	Q	E	P	H	.	.	.	.	.	.	.	.	.	.	D	L	A	E	D	V	P	P	G	F	L	D	A	D	L	A	V	H
Template Known Secondary structure				T	T	T		B					T	T		T	T		.	.	.	.	T	T	T	T	S		B			B			.					T	T							S	S	S				.	.	.	.	.	.	.	.	.	.		G	G	G	G	S		T	T	T	T		T	T
Template Predicted Secondary structure																			.	.	.	.													.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.											.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	K	W	V	I	N	C	N	W	K	F	P	A	E	Q	F	A	S	D	Q	Y	H	A	L	F	S	H	A	S	A	V	Q	V	L	G	A	K	D	D	G	S	D	K	R	L	G	D	G	Q	T	A	R	P	V	W	E	T	A	K	D	A	L	Q	F	G	Q	D	G	H	G	S	G	F	F	F	T	E	K	P
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		G	Q	H	R	V	V	D	A	N	W	R	M	G	V	E	N	G	F	.	D	A	G	H	V	F	I	H	K	S	S	I	L	L	D	G	N	D	I	A	L	P	L	G	F	A	P	G	D	P	E	Q	L	T	R	S	V	T	G	E	G	A	P	K	G	V	F	D	L	L	G	E	H	S	V	P	I	F	E	A	T
Template Known Secondary structure								S	S										T	.		T	T		G	G	G	G	T	T							T	T	B		B		S							G	G	G	S							S	S	S								T	G	G	G
Template Predicted Secondary structure																				.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.						.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		D	A	N	V	W	V	D	G	A	V	S	S	Y	Y	R	E	T	Y	A	E	A	E	Q	R	L	G	E	V	R	A	L	R	L	A	G	H	N	N	I	F	P	T	L	S	W	L	.	.	.	.	.	N	G	T	A	T	L	R	V	W	H	P	R	G	P	D	Q	V	E	V	W	A	F	C	I	T	D	K	A	A
Query Conservation																																																.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	G	Q	P	A	I	Q	G	H	M	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	M	V	A	I	S	I	S	V	W	L	P	G	V	L	K	V	D	P	F	P	D	P	T	L	T	Q	F	E	W	Y	V	P	I	D	E	G	H	H	L	Y	L	Q	M	L	G	R	R	V	G	S
Template Known Secondary structure			T	T							B			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B										T	T	T						S		S	S	T	T												T	T													S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.																	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		S	D	E	V	K	A	A	F	E	N	S	A	T	R	A	F	G	P	A	G	.	F	L	E	Q	D	D	S	E	N	W	C	E	I	Q	K	L	L	K	G	H	R	A	R	N	S	K	L	C	L	E	M	G	L	G	Q	E	K	R	R	D	D	G	I	P	G	I	T	N	Y	I	F	S	E	T	A	A	R	G	M
Query Conservation																						.
Alig confidence																						.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	E	A	R	S	F	E	A	E	F	R	E	K	W	V	E	L	A	L	N	G	F	N	D	D	D	I	L	A	R	R	S	M	E	P	F	Y	A	D	D	R	G	W	R	E	E	V	L	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	R	A	I	I	E	W
Template Known Secondary structure															T					T	T	T	T	T	T																T	S										G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.																						.	360	.	.	.	.	.	.
		425	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	R	W	A	D	L	L	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	L	A	S	Q	Y	N	R	G
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		367	.	.	370	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions