Job Description P0ABR5 Confidence 100.00% Date Thu Jan 5 11:16:07 GMT 2012 Rank 1 Aligned Residues 428 % Identity 38% Template c2gbxE_ PDB info PDB header:oxidoreductase Chain: E: PDB Molecule:biphenyl 2,3-dioxygenase alpha subunit; PDBTitle: crystal structure of biphenyl 2,3-dioxygenase from sphingomonas2 yanoikuyae b1 bound to biphenyl Resolution 2.80 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	D	T	Q	N	G	R	V	T	P	R	I	Y	T	D	P	D	I	Y	Q	L	E	L	E	R	I	F	G	R	C	W	L	F	L	A	H	E	S	Q	I	P	K	P	G	D	F	F	N	T	Y	M	G	E	D	A	V	V	V	V	R	Q	K	D	G	S	I	K	A	F	L	N	Q	C	R	H	R	A	M	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	D	T	V	N	A	S	Q	S	R	Q	V	F	W	D	E	D	V	Y	A	L	E	I	E	R	I	F	S	R	A	W	L	M	L	G	H	E	S	L	V	P	K	P	G	D	F	I	T	T	Y	M	A	E	D	K	V	I	L	S	H	Q	S	D	G	T	F	R	A	F	I	N	S	C	S	H	R	G	N	Q
Template Known Secondary structure					T	T	T	T				T																T	T	T	T	S							G	G	G	S		S	T	T								T	T									T	T	S							S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	Y	A	D	C	G	N	T	R	A	F	T	C	P	Y	H	G	W	S	Y	G	I	N	G	E	L	I	D	V	P	L	E	P	R	A	Y	P	Q	G	L	C	K	S	H	W	G	L	N	E	V	P	C	V	E	S	Y	K	G	L	I	F	G	N	W	D	T	S	A	P	G	L	R	D	Y	L	G	D	I	A
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		I	C	H	A	D	S	G	N	A	K	A	F	V	C	N	Y	H	G	W	V	F	G	Q	D	G	S	L	V	D	V	P	L	E	S	R	C	Y	H	N	S	L	D	K	Q	K	L	A	A	K	S	V	.	R	V	E	T	Y	K	G	F	I	F	G	C	H	D	P	E	A	P	S	L	E	D	Y	L	G	E	F	R
Template Known Secondary structure		S				S					S					T	T	T						T	T	S						T	T	T	T	T	T	S	T	T				T	T	T							.						T	T								S	S									G	G	G
Template Predicted Secondary structure																																																					.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Y	L	D	G	M	L	D	R	R	E	G	G	T	E	I	V	G	G	V	Q	K	W	V	I	N	C	N	W	K	F	P	A	E	Q	F	A	S	D	Q	Y	H	A	L	F	S	H	A	S	A	V	Q	V	L	G	A	K	D	D	G	S	D	K	R	L	G	D	G	Q	T	A	R	P	V	W	E	T	A	K	D
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.
Template Sequence		Y	Y	L	D	T	I	W	E	G	A	G	G	G	M	E	L	L	G	P	P	M	K	S	L	L	Q	C	N	W	K	V	P	A	E	N	F	I	G	D	G	Y	H	V	G	W	T	H	A	A	A	L	S	Q	I	G	G	E	L	A	G	L	A	G	N	R	A	D	I	P	F	D	D	.	.	.	.	.	.	L	G
Template Known Secondary structure									T	T	T	T	T														S	S		T																		T									S	S	G	G	G	G	T	T			T	T	S					.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.							.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.
Query SS confidence																																																								.	.
Query Sequence		A	L	Q	F	G	Q	D	G	H	G	S	G	F	F	F	T	E	K	P	D	A	N	V	W	V	D	G	A	V	S	S	Y	Y	R	E	T	Y	A	E	A	E	Q	R	L	G	E	V	R	A	L	R	L	A	G	.	.	H	N	N	I	F	P	T	L	S	W	L	N	G	T	A	T	L	R	V	W	H	P	R	G
Query Conservation																																																								.	.
Alig confidence															.																																									.	.
Template Conservation															.
Template Sequence		L	Q	F	T	T	R	H	G	H	G	F	G	V	.	I	D	N	A	A	A	G	L	H	I	K	R	E	G	W	T	K	F	L	E	D	T	R	G	E	V	R	R	K	F	G	P	E	R	E	R	L	Y	L	G	H	W	N	C	S	I	F	P	N	C	S	F	L	Y	G	T	N	T	F	K	I	W	H	P	R	G
Template Known Secondary structure							T	T	S						.		T	T		T	T	S	S		S	S																			T									T	S							T	T	T					T	T	T	T								S	S
Template Predicted Secondary structure															.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	Q	V	E	V	W	A	F	C	I	T	D	K	A	A	S	D	E	V	K	A	A	F	E	N	S	A	T	R	A	F	G	P	A	G	F	L	E	Q	D	D	S	E	N	W	C	E	I	Q	K	L	L	K	G	H	R	A	R	N	S	K	L	C	L	E	M	G	L	G	Q	E	K	R	R	D	D	G	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	H	E	I	E	V	W	T	Y	T	I	V	P	R	D	A	D	P	A	T	K	S	M	I	Q	R	E	A	I	R	T	F	G	T	A	G	T	L	E	S	D	D	G	E	N	M	S	S	A	T	Y	I	N	R	G	V	I	T	R	N	G	R	M	N	S	T	M	G	V	G	Y	E	G	P	H	P	V	Y	P	G
Template Known Secondary structure		T	T												S	S	S																	S	T	T		T	T														G	G	G	S					T	S						T	T	S	S	S					S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	T	N	Y	I	F	S	E	T	A	A	R	G	M	Y	Q	R	W	A	D	L	L	S	S	E	S	W	Q	E	V	L	D	K	T	A	A	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	G	I	S	F	I	G	E	T	S	Y	R	G	F	Y	R	F	W	K	E	M	I	D	A	P	D	W	A	S	V	K	A	N	D	D	T	W
Template Known Secondary structure					S		S	S	S	S																	S	S						T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.