Job Description P0ABR5 Confidence 100.00% Date Thu Jan 5 11:16:07 GMT 2012 Rank 21 Aligned Residues 347 % Identity 17% Template c2de7B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:terminal oxygenase component of carbazole; PDBTitle: the substrate-bound complex between oxygenase and2 ferredoxin in carbazole 1,9a-dioxygenase Resolution 2.00 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		E	L	E	R	I	F	G	R	C	W	L	F	L	A	H	E	S	Q	I	P	K	P	G	D	F	F	N	T	Y	M	G	E	D	A	V	V	V	V	R	Q	K	D	G	S	I	K	A	F	L	N	Q	C	R	H	R	A	M	R	V	S	Y	A	.	D	C	G	N	T	R	A	F	T	C	P	Y	H	G	W	S	Y
Query Conservation																																																																.
Alig confidence																						.																				.																						.
Template Conservation																						.																				.
Template Sequence		D	A	K	L	G	F	R	N	H	W	Y	P	V	M	F	S	K	E	I	N	.	E	G	E	P	K	T	L	K	L	L	G	E	N	L	L	V	N	R	I	.	D	G	K	L	Y	C	L	K	D	R	C	L	H	R	G	V	Q	L	S	V	K	V	E	C	K	T	K	S	T	I	T	C	W	Y	H	A	W	T	Y
Template Known Secondary structure				T	T		B	S	S								G	G	G	S		.	B	T								T	T									.	T	T							S	S		T	T	T				G	G	G	G					S	T	T					T	T	T
Template Predicted Secondary structure																						.																				.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		113	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure				.																																													.
Query SS confidence				.																																													.
Query Sequence		G	I	.	N	G	E	L	I	D	V	P	L	E	P	R	A	Y	P	Q	G	L	C	K	S	H	W	G	L	N	E	V	P	C	V	E	S	Y	K	G	L	I	F	G	N	W	D	T	.	S	A	P	G	L	R	D	Y	L	G	D	I	A	W	Y	L	D	G	M	L	D	R	R	E	G	G	T	E	I	V	G	G
Query Conservation				.																																													.
Alig confidence				.														.	.	.	.													.															.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.													.																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	W	E	D	G	V	L	C	D	I	L	T	N	P	T	S	.	.	.	.	A	Q	I	G	R	Q	K	L	K	T	Y	P	.	V	Q	E	A	K	G	C	V	F	I	Y	L	G	D	G	D	P	P	P	L	A	R	D	T	P	P	.	.	.	.	.	.	.	.	.	.	.	N	F	L	D	D	D	M	E	I	L
Template Known Secondary structure			T	T	T		B					T	T		T	T		.	.	.	.	T	T	T	T	S		B						.					T	T							S	S	S	S				G	G	G	G	S		T	.	.	.	.	.	.	.	.	.	.	.	T	T	T		T	T
Template Predicted Secondary structure																		.	.	.	.													.																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.												.	.	.	.	.	.	.	.	160	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	K	W	V	I	N	C	N	W	K	F	P	A	E	Q	F	A	S	D	Q	Y	H	A	L	F	S	H	A	S	A	V	Q	V	L	G	A	K	D	D	G	S	D	K	R	L	G	D	G	Q	T	A	R	P	V	W	E	T	A	K	D	A	L	Q	F	G	Q	D	G	H	G	S	G	F	F	F	T	E	K	P
Query Conservation
Alig confidence																				.						.
Template Conservation																				.						.
Template Sequence		G	K	N	Q	I	I	K	S	N	W	R	L	A	V	E	N	G	F	.	D	P	S	H	I	.	Y	I	H	K	D	S	I	L	V	K	D	N	D	L	A	L	P	L	G	F	A	P	G	G	D	R	K	Q	Q	T	R	V	V	D	D	D	V	V	G	R	K	G	V	Y	D	L	I	G	E	H	G	V	P	V	F
Template Known Secondary structure								S	S										T	.		S	S	G	G	.	G	G	G	T	T							T	T					S						S													T	T									T	T	T	T	S
Template Predicted Secondary structure																				.						.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.						.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		D	A	N	V	W	V	D	G	A	V	S	S	Y	Y	R	E	T	Y	A	E	A	E	Q	R	L	G	E	V	R	A	L	R	L	A	G	H	N	N	I	F	P	T	L	S	W	L	.	.	.	.	.	N	G	T	A	T	L	R	V	W	H	P	R	G	P	D	Q	V	E	V	W	A	F	C	I	T	D	K	A	A
Query Conservation																																																.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	T	I	G	G	E	V	V	R	E	G	A	Y	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	K	I	V	A	N	D	I	S	I	W	L	P	G	V	L	K	V	N	P	F	P	N	P	D	M	M	Q	F	E	W	Y	V	P	I	D	E	N	T	H	Y	Y	F	Q	T	L	G	K	P	C	A	N
Template Known Secondary structure						T	T										S	.	.	.	.	.	.	.	.	.	.	.	.	.					S						T	T	T						S		S	S	T	T												T	T													S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.														.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		S	D	E	V	K	A	A	F	E	N	S	A	T	R	A	F	G	.	P	A	G	F	L	E	Q	D	D	S	E	N	W	C	E	I	Q	K	L	L	K	G	H	R	A	R	N	S	K	L	C	L	E	M	G	L	G	Q	E	K	R	R	D	D	G	I	P	G	I	T	N	Y	I	F	S	E	T	A	A	R	G	M
Query Conservation																			.
Alig confidence																			.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	E	E	R	K	K	Y	E	Q	E	F	E	S	K	W	K	P	M	A	L	E	G	F	N	N	D	D	I	W	A	R	E	A	M	V	D	F	Y	A	D	D	K	G	W	V	N	E	I	L	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	E	A	I	V	A	W
Template Known Secondary structure															T					T	T	T	T	T	T																T	S	T									G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.																						.	.	360	.	.	.	.	.
		425	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	Q	R	W	A	D	L	L	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	L	A	S	E	H	N	Q	G
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		366	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions